Gene detail

Detailed information of ANN06196-RA in Leptoseris scabra

Genomic Location: Scaffold_5__1_contigs__length_58733080:45402396...45405902
NR annotation: CAH3154558.1, unnamed protein product, partial [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P59807	Chondroitin sulfate ABC endolyase OS=Proteus vulgaris OX=585 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02278	Lyase_8	Polysaccharide lyase family 8, super-sandwich domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039174	Family	Chondroitin sulfate ABC lyase	Interproscan
IPR014718	Homologous_superfamily	Glycoside hydrolase-type carbohydrate-binding	Interproscan
IPR011071	Homologous_superfamily	Polysaccharide lyase family 8-like, C-terminal	Interproscan
IPR011013	Homologous_superfamily	Galactose mutarotase-like domain superfamily	Interproscan
IPR003159	Domain	Polysaccharide lyase family 8, central domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37322	-	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006027	Biological Process	glycosaminoglycan catabolic process	Interproscan
GO:0030246	Molecular Function	carbohydrate binding	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0016829	Molecular Function	lyase activity	Interproscan