Gene detail

Detailed information of ANN06199-RA in Leptoseris scabra

Genomic Location: Scaffold_5__1_contigs__length_58733080:45474131...45475609
NR annotation: XP_020632602.1, uncharacterized protein LOC110069416 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02278	Lyase_8	Polysaccharide lyase family 8, super-sandwich domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014718	Homologous_superfamily	Glycoside hydrolase-type carbohydrate-binding	Interproscan
IPR039174	Family	Chondroitin sulfate ABC lyase	Interproscan
IPR003159	Domain	Polysaccharide lyase family 8, central domain	Interproscan
IPR011013	Homologous_superfamily	Galactose mutarotase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37322	-	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0030246	Molecular Function	carbohydrate binding	Interproscan
GO:0006027	Biological Process	glycosaminoglycan catabolic process	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0016829	Molecular Function	lyase activity	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10345	SPSB3, SSB3; SPRY domain-containing SOCS box protein 3	-	Ubiquitin system	ko04121	deepkoala