Gene detail

Detailed information of ANN06462-RA in Leptoseris scabra

Genomic Location: Scaffold_5__1_contigs__length_58733080:49987142...49999113
NR annotation: KAJ7391607.1, hypothetical protein OS493_017304 [Desmophyllum pertusum]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN06462-RA

ATGTACTGCGACTTAAACAAAGCATTGCGCAAAGATTCAATAAAGTTATCTTGGGAAGACAGAGTTAGGATAGCTCTTCACACGGCTAGGGCTTTGAAGTATTTGCACTCAGAAGTCACAAATGAGAAAGCTGTCAGACAAGAGATTGTGCACATGGATGTAAAGCCAGGAAATATTTTCCTAGATGAAGATTTCAATGCCCGCCTGGGGGATGCTGGGATGGCACTGGAGTTATCTATGGGATTCTCATTTGCCTCCATTTCTCAGATCCGTGGAACAGAGGGGTACATCGATGAGTACCTTGATGGAAGACACTTTAAACCCAGCAATGATATTTTTTCATTTGGAGTTGTGCTGTTGCAACTTCTTACACAGAGGAAGGCAGTTGAAGTAACTGCACCAAAGAAGAATGTATCCTTGCACCGTGTTCTTAAGAAAGAAGGATTGTTATCAGATCCAGAGAAGCTCGTGGAAAAGGCAAAACAGGGAGTTTGGCCTGATAATGGAGACGACAAGAATTACACCAAAGACTTTGCTGGTATTGCTATAGACTGTCTCAGACCACCGGTGGAAAGAGCCAAGCTGTCAGATATTTGTTTGAGGCTGGAGAAAATACTAGCAAGGAAAGGAGTTGCAAAGATTTCAAAGCGCAAGGAAGGAGCCTGTTGTATGTCTTGTCTGCTGAACCATCCAGCAAAGTACTTGGTAGTGAGATCACCCAGCTGTGATGGTGATCATCATAGTCAAGACTGCAATTACTTCTGTGTGACATGTTTAACACAAGCTCGGCGCAATCCTCTGGAGTGTCCATCCCATGGGCCAGCTGAACCTCCTGTAGGGGGATCTTATGCCTATGCAGTTTTGATATGTGGCAATGACCCCCACTTGAAAACCAATGCTGCAGTATTTGAAAGAGATTTATTTGGCATCAGAAGTGTCCTGACAGACACCCGCATTGTCGGGATCAGGAATGATCACGTGTATTGTATTAAGCCACAGTCAGGTGACATTTCACAGGCAGCTGAGGTCAAACGAACACTTCTCATGTTAAAGCAAGCGCTGCAGGGAAAGAAAGATGTGTTCCTGTACTTTTACTTCTCTGGTCACAGTGACCGCAATGGTAACTTGATTTGTTCCTCAGAAAAGGATATTCTTACAGGGGCTGAATTGAAGGATCATTTGCACCTTCTCAAGGACAATGTTGGAGAATTCTTGATTATATTGGACTGCTGTTATGCAGATGGTAAGATTGCTTCTGAGCATCTTGAGGATGAAGCTTTTCTTGTTCATAAGTCTTTAGAACCTACAGCAGTTGAACCAGAACCACCACATTGTCTGCCGCTGGAATCACTCTGCAGTGAACTTCATCACAGTGCCCCTGCGAAGGAGCCTGTTTCAAGTGCTGCAGAACAATTTTCTGAGTCTGATTTTGATACACTGGATGGAAATGTGTTTTGCAAGGCTCCATTGGATGTGCATTTCACAGTACGGCAGTGGTCATCTTCTTCAAGGGAGCAGCAATCCTATGGAAAGGCCAAAGGCAACAGTTTTTTGACAGACTACATAATTCGTGGTTTGCAGGGTGCACACAAATGCCCTTTTGCAAAGCCGAAATGCTCTGACTGTGACAGATTTAAGGACACAGCAAAATCCGTAGGTTTTATTTCTGCCGCTAACTTGGAAGATTTTGTCTCCAAACACGTTGAGAAAGCTGCGTCAAAAGCTGGTGGCAGGCATCAGAATCCACGGATGCGAACCATGCATTCCAAGGAGACGATATTGGCCTACTACAATGAAGAGATCCTGCGGGATCAGATTGTTTTCAAATCAACCTCTGGTGATCGTGAAAGAATCACAGTAGATGGTTTTCCACTCCAACTTGAGGGATTTCAGAAGCAGATATTTTCTCAGGTTAAAGGTAATCTTCCAATCTGTGCTCAGCCAAAGCACCTTCAGATTCTTTGTGACGATGAAGAGATTTCGTCCAATTCATATGTTGACCTGAAGGATTTTGTCCGACAAGGATACGATGTCTGCTGCCAGCTGAGACCTTGTCTAAGTATCTTTAGTGGCCCAGTTGTGATACAGATTGAGAACCACAGGAGTCTTGTTATGAATCTCTTAAGTTCTCTTAAATTGACAACAAGCCAGGAAGTGGACATGACCTATGAGTTGGACACCAGCCAGAGATCATTTTCTGCTGAGGATGTCAAAGAATGTATTGAGGACAATTCAAGCTTCAGTGACTTGAAGGACACTTCTCTTGGAGACATGATTGTCTTGATCCTTACAACAGCATCTCATTACACAGGGATTTTAACAATCTGTGTTCTGGATGACAGCTTAGACTGCAGTTTCAAGGTCGCAACTTGA

Transcript

ANN06462-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q84M95	Probable serine/threonine-protein kinase PBL28 OS=Arabidopsis thaliana OX=3702 GN=PBL28 PE=2 SV=1
Q6XAT2	LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana OX=3702 GN=ERL2 PE=1 SV=1
C0LGW6	LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana OX=3702 GN=ERL1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0012119 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00656 all species →	Peptidase_C14	Caspase domain	Domain	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011600 all species →	Domain	Peptidase C14, caspase domain	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR27001 all species →	OS01G0253100 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004197 all species →	Molecular Function	cysteine-type endopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN06462-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.