Detailed information of ANN06640-RA in Leptoseris scabra

Genomic Location: Scaffold_5__1_contigs__length_58733080:53534314...53550282
NR annotation: XP_020615497.1, tyrosine-protein phosphatase non-receptor type 13-like isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q12923Tyrosine-protein phosphatase non-receptor type 13 OS=Homo sapiens OX=9606 GN=PTPN13 PE=1 SV=2
Q64512Tyrosine-protein phosphatase non-receptor type 13 OS=Mus musculus OX=10090 GN=Ptpn13 PE=1 SV=2
A0A140LI67FERM and PDZ domain-containing protein 2 OS=Mus musculus OX=10090 GN=Frmpd2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09379FERM_NFERM N-terminal domain DomainInterproscan
PF09380FERM_CFERM C-terminal PH-like domainDomainInterproscan
PF00373FERM_MFERM central domainDomainInterproscan
PF12012DUF3504Domain of unknown function (DUF3504)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000299DomainFERM domainInterproscan
IPR018979DomainFERM, N-terminalInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR018980DomainFERM, C-terminal PH-like domainInterproscan
IPR001478DomainPDZ domainInterproscan
IPR052074FamilyNon-receptor Tyrosine-protein PhosphatasesInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR019748DomainFERM central domainInterproscan
IPR014352Homologous_superfamilyFERM/acyl-CoA-binding protein superfamilyInterproscan
IPR035963Homologous_superfamilyFERM superfamily, second domainInterproscan
IPR021893DomainDomain of unknown function DUF3504Interproscan
IPR013762Homologous_superfamilyIntegrase-like, catalytic domain superfamilyInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR011010Homologous_superfamilyDNA breaking-rejoining enzyme, catalytic coreInterproscan
IPR019749DomainBand 4.1 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46900TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 13Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

TOP