Gene detail

Detailed information of ANN06705-RA in Leptoseris scabra

Genomic Location: Scaffold_5__1_contigs__length_58733080:54732703...54750642
NR annotation: CAH3159314.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN06705-RA

ATGGTCGCCTCAAAATCCTCTATCGATAAAGAAGCTGTACGCATTATGGGAGAAAGTGGCCTGATAGAACTTGGGCTAGTTGCCAAAGGTGACCGACTGAAATTGGAAGCCTTCTGTAAAGCTAGTGCTATGTCCACTGACAAAGAAGAGAAAATTTTGAAGATTAAAGAGATCCTTGAGCAAGGAAAAAAAGGCAGGAAACGTGACGCGCCACAAACCTCCGGCGATGCGGGAACAAGCAAGAAAGTAAGTCAAAGCACTGCTTGTGGTGGTACAAAAAGTAAATCGGCAAAATCAGCAACCTTAAAATTTGAGTTTGGATGGAAACACTGGCGAGTTGGGCGCGGTTTTGTTCAGCAGAAGAAAAATGTCGGTGGCGGAACGCGTACCTTTCAAGTACCACGGGAAGCAACGCTTGACGACTGCCAAACAATTGCCCAAAGCCTCTTTTTCCCCGATGGGTGTTGTGCAGCTGGTGATTTAGAGGAAATGATTACTACCATGGCTGATTTTAGTGGCAATTTAGTTGCCTTGATGAAAGAAGGCGAAAAGCCTTTTCGCTTCACAGCTGAAAGGTACAAGCAACGTACAGGCTTATCTGTTCCCCGTTTGTATCTCTTAACTAAACTTGCTTGTGAGGACGAGTCATCCGATGCAGACTCCTTACCACCAGTGTTTGATGAAGTTACAAAATCAAGCCCGTTTCCTGTTTCTGAGAATGATGGGTTGATTGGAACTACAGCAGAGCGGCAGGAATTTTTCTGTGATCTTGAGGAGGAGCTGAGAACATCCCTTGAAGCTGATAAAGCAAAAGAAAACAGAAAAGAGGAAAGAAGGTTGGCATTTGAGTCAGAGTCAGAGTCAGAGTGTTTAGGTGATCAAGAATTCAAAGAGGATCGACTAGAACGACTTCGTTTGATACGCGACCTACGCTGCCCCCCGGAACCAAACAGCGATGACCATCAGGTGAGGGTCTCTGTGCGCCATACCTCATTGGGTGTGGTCACTAGGGCTTTCGACCCTGATGGGAGTATCCAAGGAATTTACGATTGGATTGGCTCCCTCTGTAGATTACCCGAACATTTTCGTCTTATACGTTTTCCATCAACAACGTTGTACCCAGAGGAGAAGATTGAATGTGTTAAAAACACAATCCTCAACATGACCGTAGAAACAGATCCAGTGCCACTTGCCCTTGATGAAGTCGAAGTTCACTTTCAAGATGGTCAAGGACTTGACGAGAAGCTGGAAGAGACCCTGAAGAATGAAAGAGACGAGTCTGTTGTCGATGAGGTGTTTTCACCAGCGCCAGCACAAATAGCTAGCTTCTCAGCTGAGATACAGGCAGATGCCATCCCTCCAGTTCATCTACTATCGGATGAGGGCAACCTAAAGAATGACGTAAACCAAAGACTCGAAGAAAAGCGCATCAACTACCTACGTTCCAACGTATTGCCCACTAAGATTGTCATAGTAGATCGCCATGACGTGGTTAAAGAGTTACTTGGTCTTTACAGGGACGAAGAAATCCTACGCTCAAGGCTATCGGTGTCTTTTCTTGACGAAACGGCCCTCGGAGATGGTGTTTTAAGAGAGATGTACTCCCTTTTTTGGGACTCATTCACATCAAGTTATTGTGAAGGCAACGAACAGTTTGCTTTGATTGCACATCCTACCCTTAGTGATGCAGATTACATATCTATTGGCAGGATAATAACTCATCAGTTTATCCTCACTGGCACATTTCCAGTACAAGTCGCCGAGGCCCAGGTCCAACATGCCATGTTTGGTCAAGCCTCTGATGAATGCATAGTCAATTCATTTCTGCAGCTATTACCCGAGAGAGAGCAGAAGATTTTGGCGAAAGCACGGATTGAGCGTGCCCCTTTTCCTACCAATGAAGTGATAGATATTCTGTCAGAGTTCAGTGCCACATCCTATCCAACACCGGAGAATCTTCAACAAATTTTGAAGCAGGTGTCCACCTCAGAGTTGATCCACAAGCCTTACTTTTTGCTCTCGAAGATAAAACAGGGGATGGGAGACTTCTGGAAAGATGTAACCGAAGAGGAAATGCACGAGCTTTACACAAGAACTTTCCCTACCTCCACCAATGTTATTGCATGCCTCCAGTTTAGCATTGATGACAAGCAAGAGGAGAAGGTGTCCGGATGGCTGATTCGTTTTCTAAAAGGCGCAGATGCAAAATTATTGTGCCGATTTCTACGTTTCTGTACAGGGGGCAATATAGTGCTTCCTGGTAACAAAATACAAGTGCGATTCGAGAGCATGTCCCAATTTGCCTTGCGACCGAAAGCTAAAACGTGTTTTCGTACTCTGACATTACCTAAAGGGTACAACAGTTTTGCTCATTTCTCGTCCAACCTGGAGTTGTACTTGTCAAACATGTCCCTATGGGAACTCAGAGATTGA

Transcript

ANN06705-RA

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity\|HECT

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00632	HECT	HECT-domain (ubiquitin-transferase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035983	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR000569	Domain	HECT domain	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan