Detailed information of ANN06772-RA in Leptoseris scabra

Genomic Location: Scaffold_5__1_contigs__length_58733080:56262597...56263334
NR annotation: XP_015758480.1, PREDICTED: CDC42 small effector protein 2-like [Acropora digitifera]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A1L1K4CDC42 small effector protein 2 OS=Rattus norvegicus OX=10116 GN=Cdc42se2 PE=3 SV=2
Q5FVD7CDC42 small effector protein 2-A OS=Xenopus laevis OX=8355 GN=cdc42se2-a PE=3 SV=1
Q5R4F8CDC42 small effector protein 2 OS=Pongo abelii OX=9601 GN=CDC42SE2 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008295 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00786
all species →		PBDP21-Rho-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036936
all species →		Homologous_superfamilyCRIB domain superfamilyInterproscan
IPR000095
all species →		DomainCRIB domainInterproscan
IPR039056
all species →		FamilyCDC42 small effector proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13502
all species →		CDC42 SMALL EFFECTOR PROTEIN HOMOLOGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0031267
all species →		Molecular Functionsmall GTPase bindingInterproscan
GO:0035023
all species →		Biological Processregulation of Rho protein signal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN06772-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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