Gene detail

Detailed information of ANN06883-RA in Leptoseris scabra

Genomic Location: Scaffold_5__1_contigs__length_58733080:58395169...58409421
NR annotation: CAH3030746.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96DP5	Methionyl-tRNA formyltransferase, mitochondrial OS=Homo sapiens OX=9606 GN=MTFMT PE=1 SV=2
Q9D799	Methionyl-tRNA formyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Mtfmt PE=2 SV=3
Q5I0C5	Methionyl-tRNA formyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mtfmt PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003249 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00551 all species →	Formyl_trans_N	Formyl transferase	Domain	Interproscan
PF02911 all species →	Formyl_trans_C	Formyl transferase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005794 all species →	Family	Methionyl-tRNA formyltransferase	Interproscan
IPR044135 all species →	Domain	Methionyl-tRNA formyltransferase, C-terminal domain	Interproscan
IPR011034 all species →	Homologous_superfamily	Formyl transferase-like, C-terminal domain superfamily	Interproscan
IPR041711 all species →	Domain	Methionyl-tRNA formyltransferase, N-terminal domain	Interproscan
IPR002376 all species →	Domain	Formyl transferase, N-terminal	Interproscan
IPR005793 all species →	Domain	Formyl transferase, C-terminal	Interproscan
IPR036477 all species →	Homologous_superfamily	Formyl transferase, N-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11138 all species →	METHIONYL-TRNA FORMYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004479 all species →	Molecular Function	methionyl-tRNA formyltransferase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0071951 all species →	Biological Process	conversion of methionyl-tRNA to N-formyl-methionyl-tRNA	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0009058 all species →	Biological Process	biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00604	MTFMT, fmt; methionyl-tRNA formyltransferase	EC:2.1.2.9	Aminoacyl-tRNA biosynthesis	ko00970	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.