Detailed information of ANN06905-RA in Leptoseris scabra

Genomic Location: Scaffold_6__1_contigs__length_62720928:278442...292514
NR annotation: CAH3171222.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96A44SPRY domain-containing SOCS box protein 4 OS=Homo sapiens OX=9606 GN=SPSB4 PE=1 SV=1
Q8R5B6SPRY domain-containing SOCS box protein 4 OS=Mus musculus OX=10090 GN=Spsb4 PE=1 SV=1
Q5E9X6SPRY domain-containing SOCS box protein 1 OS=Bos taurus OX=9913 GN=SPSB1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003352 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07177
all species →		NeuralizedNeuralizedDomainInterproscan
PF00622
all species →		SPRYSPRY domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043136
all species →		Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR050672
all species →		FamilyF-box/SPRY and SOCS box protein familiesInterproscan
IPR000225
all species →		RepeatArmadilloInterproscan
IPR006573
all species →		DomainNeuralized homology repeat (NHR) domainInterproscan
IPR003877
all species →		DomainSPRY domainInterproscan
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR001870
all species →		DomainB30.2/SPRY domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12245
all species →		SPRY DOMAIN CONTAINING SOCS BOX PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0019005
all species →		Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0043161
all species →		Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN06905-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP