Genomic Location: Scaffold_6__1_contigs__length_62720928:399890...425605
NR annotation: XP_048588174.1, uncharacterized protein LOC125556677 isoform X1 [Nematostella vectensis]
| CDS | ||||
| ANN06911-RA | ||||
| Transcript |
| ANN06911-RA |
| Protein |
| ANN06911-RA |
| Uniprot term | Description | |||
|---|---|---|---|---|
| A2VDN6 | Splicing factor 3A subunit 1 OS=Bos taurus OX=9913 GN=SF3A1 PE=2 SV=1 | |||
| Q15459 | Splicing factor 3A subunit 1 OS=Homo sapiens OX=9606 GN=SF3A1 PE=1 SV=1 | |||
| Q8K4Z5 | Splicing factor 3A subunit 1 OS=Mus musculus OX=10090 GN=Sf3a1 PE=1 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | ULD|UBL|NEDD8 |
| Ubiquitin Family | ULD|UFD/UBQ|UBQ_Other |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12230 | PRP21_like_P | Pre-mRNA splicing factor PRP21 like protein | Family | Interproscan |
| PF05380 | Peptidase_A17 | Pao retrotransposon peptidase | Family | Interproscan |
| PF01805 | Surp | Surp module | Family | Interproscan |
| PF00240 | ubiquitin | Ubiquitin family | Domain | Interproscan |
| PF03564 | DUF1759 | Protein of unknown function (DUF1759) | Family | Interproscan |
| PF18701 | DUF5641 | Family of unknown function (DUF5641) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR022030 | Domain | Splicing factor 3A subunit 1, conserved domain | Interproscan |
| IPR000626 | Domain | Ubiquitin-like domain | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR000061 | Domain | SWAP/Surp | Interproscan |
| IPR035563 | Domain | Splicing factor 3A subunit 1, ubiquitin domain | Interproscan |
| IPR035967 | Homologous_superfamily | SWAP/Surp superfamily | Interproscan |
| IPR001584 | Domain | Integrase, catalytic core | Interproscan |
| IPR008042 | Family | Retrotransposon, Pao | Interproscan |
| IPR029071 | Homologous_superfamily | Ubiquitin-like domain superfamily | Interproscan |
| IPR005312 | Family | Protein of unknown function DUF1759 | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR040676 | Domain | Domain of unknown function DUF5641 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22955 | RETROTRANSPOSON | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0006396 | Biological Process | RNA processing | Interproscan |
| GO:0015074 | Biological Process | DNA integration | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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