Detailed information of ANN07023-RA in Leptoseris scabra

Genomic Location: Scaffold_6__1_contigs__length_62720928:2378253...2379386
NR annotation: KAJ7372451.1, hypothetical protein OS493_018958 [Desmophyllum pertusum]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001627 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00096
all species →
zf-C2H2Zinc finger, C2H2 typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036236
all species →
Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR013087
all species →
DomainZinc finger C2H2-typeInterproscan
IPR050717
all species →
FamilyC2H2-type Zinc-Finger Transcription RegulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14196
all species →
ODD-SKIPPED - RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000977
all species →
Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0001655
all species →
Biological Processurogenital system developmentInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009790
all species →
Biological Processembryo developmentInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN07023-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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