Gene detail

Detailed information of ANN07027-RA in Leptoseris scabra

Genomic Location: Scaffold_6__1_contigs__length_62720928:2431325...2433633
NR annotation: KAJ7372448.1, translation initiation factor eIF4E [Desmophyllum pertusum]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P48597	Eukaryotic translation initiation factor 4E OS=Xenopus laevis OX=8355 GN=eif4e PE=1 SV=1
Q9N0T5	Eukaryotic translation initiation factor 4E OS=Bos taurus OX=9913 GN=EIF4E PE=2 SV=2
P06730	Eukaryotic translation initiation factor 4E OS=Homo sapiens OX=9606 GN=EIF4E PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007358 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01652 all species →	IF4E	Eukaryotic initiation factor 4E	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019770 all species →	Conserved_site	Eukaryotic translation initiation factor 4E (eIF-4E), conserved site	Interproscan
IPR023398 all species →	Homologous_superfamily	Translation Initiation factor eIF- 4e-like	Interproscan
IPR001040 all species →	Family	Translation Initiation factor eIF- 4e	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11960 all species →	EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003743 all species →	Molecular Function	translation initiation factor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006413 all species →	Biological Process	translational initiation	Interproscan
GO:0000340 all species →	Molecular Function	RNA 7-methylguanosine cap binding	Interproscan
GO:0016281 all species →	Cellular Component	eukaryotic translation initiation factor 4F complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN07027-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.