Detailed information of ANN07037-RA in Nanomia septata

Genomic Location: chr2:182394634...182399902
NR annotation: XP_002162358.2, E3 ubiquitin-protein ligase MARCHF1-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q28IK8E3 ubiquitin-protein ligase MARCHF8 OS=Xenopus tropicalis OX=8364 GN=marchf8 PE=2 SV=1
Q8TCQ1E3 ubiquitin-protein ligase MARCHF1 OS=Homo sapiens OX=9606 GN=MARCHF1 PE=1 SV=1
Q6NZQ8E3 ubiquitin-protein ligase MARCHF1 OS=Mus musculus OX=10090 GN=Marchf1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12906RINGvRING-variant domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR011016DomainZinc finger, RING-CH-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45981LD02310PInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0002495Biological Processantigen processing and presentation of peptide antigen via MHC class IIInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005764Cellular ComponentlysosomeInterproscan
GO:0006955Biological Processimmune responseInterproscan
GO:0031901Cellular Componentearly endosome membraneInterproscan
GO:0031902Cellular Componentlate endosome membraneInterproscan
GO:0042287Molecular FunctionMHC protein bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10656MARCH1_8; E3 ubiquitin-protein ligase MARCH1/8EC:2.3.2.27
Ubiquitin systemko04121deepkoala

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