Detailed information of ANN07092-RA in Leptoseris scabra

Genomic Location: Scaffold_6__1_contigs__length_62720928:3674257...3678497
NR annotation: CAH3045594.1, unnamed protein product [Porites lobata]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005522 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05510
all species →		Sarcoglycan_2Sarcoglycan alpha/epsilon N-terminal domainDomainInterproscan
PF20989
all species →		Sarcoglycan_2_CSarcoglycan alpha/epsilon second domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048346
all species →		DomainSarcoglycan alpha/epsilon, N-terminal domainInterproscan
IPR048347
all species →		DomainSarcoglycan alpha/epsilon second domainInterproscan
IPR008908
all species →		FamilySarcoglycan alpha/epsilonInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10132
all species →		ALPHA-/EPSILON-SARCOGLYCAN FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016012
all species →		Cellular Componentsarcoglycan complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K12565SGCA; alpha-sarcoglycan-Viral myocarditisko05416deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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