Gene detail

Detailed information of ANN07171-RA in Montipora grisea

Genomic Location: Scaffold_9__1_contigs__length_82041408:37434361...37438794
NR annotation: XP_015755204.1, PREDICTED: uncharacterized protein LOC107334747 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN07171-RA

ATGGAGTTGGGTTGGTATGAGACCATTTTGAAAAAATGGTCTCGTACCCCCAACTCCTATACTACTGAGGGCACAAGGAAAGATTATGAAGCAGAGATGGCAAGGTTGGATGCAGAAAACAGAGAGCTTAAGACAAGGGCATCCAAAGAGAAGGAAGAAAGAGAGAAGTTACAAGAACTGATGAAAACAAAGGAAAGAGAGCTTTCCTCACTGAGACAGGAATTAGAAATGATGAAAGAGAAACGCATCTTGGAAAGCGAAATCAAGGGGATTGTCGACCCGGAAAGCAGGAGAACACCGCTAAGACCACTGGAACTTTCTCAGAGGTTCAATAGTTATAGCGATACTTGGGAGAACTATTATGCTTCTTCTTCTTACCAAATGGCGCATTCAAATCAGTCATTGCCGCCGAACATTTTACCGACAACAACAGCTGCCTGCAACACTGCGGAGCGTTCAATTGCTGGCGGTCAGGAGATTAAACCACTGGATAGAAAGAGGGATGAAATGAATGAAAATTTACTCGTTCTTCAGGTGCAGATTACTAGTGCTTCTGGCCAATTGCAGAAACTAAAAGCAGAGCAACAAGAATTCACTTCATTAGCGGCGATTCGGGGACGAATTTGTAATAGGTGTCATCGAAGTGGTCACACAAAAACCACCTGTAAATCAAGCCCTTGTGAAAGTATCAACAACTGCAAGATCCGTGAAAAACACCCCGAGATAAAAAACAAAATATCGTCATTGCAAGCGGAACTTAAAGAGCTACAGAAACAGCACGAAAAGCAGTCGAGTGAATTAGAAAAATTCATGGCATCCAGAGAAAAATCAAAATCCAGTTTCTTCTCCGTTATGCGCAATCGTCTTCGTTTGCAGAATTTGCCCAAATACACAGATCGTTTGAGACTAGACAAGGACTTGTTGGTGTTACAACGTGCGCTACGAAATCAAGTCCCACAATGGAAACCCGAAGAAGGCGATTGGCAACTGCCGATGATAATTGAACAATATCATCACGCTAAAGTTGCCCCTTATTTGCCAGCGCAAAACTATTTTGTTAATGCAAACGTCCAACTTCGCATAAACCGAAAAGGAGGCTGTTATGACAATGGAAGACCCTACCCTGACATAATAAGAGAACGAGTGTTAGATTTAGCTCATGCAGGCACAAGCCAACGTCAAATTGCAACAGAACTTCGGGTTAGTCGGGGTTACGTGCAAAAAGTTCTTGAACAGTACAATGATAAAAACATTTCATTACGAATTCCCCGTACTAGTTTTTTGGTTTCAAAAATTTCCAATGAAGTTCTCGAGTTTATGTCTGTTGAGAAAATTATGAAGCCAAGTGTCCATGCCTCTGAAATACGACAGAGACTTTTGTTGGATGGCGTTGTAGATGCTGACGATTTGCCGAGTGCTTCTCAAATAAATAAACGAATAACGCGTGACTTGGTGATGAGCAAAAAGAAACTATCAGTCATACCGTCAGAAAGCACTACTCCTGAACAAATTGCCAGACAAGACGAATATCTTAACGTCATATCTACATTTCAACCACACCAAATCCATTTCTTTGACGAGGCAAGTGTGATAAAAACCAGTGGGAATCGTAGTTACGGGAACGCTACCGTCGGCGAGAAAGCAGTCGAGTTTCAACGATACGCTTCGAACGCCAATTTTACCATCAACTTGCTCCACTCAGTACGTGGGGTAGACTATTATAATATTCTTGACGGCCCGTCGAATGGATTTCAGTTGCTTTACTTTTTTGAAGATGCTGTTGAAATTCAACGCCCTGATGGAAGTGTTCTTCTTGAGCGTGGCGATTGCGTCGTGATGGACAATTGTGGTTTTCACCATGGTCTGTTTGTTGAGCCTGTTCTAAGAGAACTGTTGAATGACTATGGCGTCCAGCTTATTTACCAGCCACCTTACTCACCACATCTAAATACGTGTGAATATTGTTTTCACCAAATAAAGGAATTCTTGCGGAGATGTCAAATGTTAGCGATAGAAGAGACCGAAATTGCCATAGCCGAGGAACAAAATGCAACCAAAAGAGCTGCTGGTACAGCTGCCTTAAAAGCTGCTTCAGAAATGCTGCAGGTCAAAGTGACACCAGTTGAATTGACCATGGAAAACAAAGAGAAAACCACTTCCTCGGACTCCAGGAAGGACAGAAACAAATGCCCGCTCTGTAAGAAGTCGTCGGAAGGTGACTGGCAGCAGTGCACCGTAAAGCAGTGCGCCCAATGGGTGCACTGCAGGTGCGAAGCAAAACTAGACGAATCTTACAGCTGTCCATATTGCAGGGGTCAGCTTGCTGAGTAA

Transcript

ANN07171-RA

Protein

Uniprot

Uniprot term	Description
Q06710	Paired box protein Pax-8 OS=Homo sapiens OX=9606 GN=PAX8 PE=1 SV=2
Q00288	Paired box protein Pax-8 OS=Mus musculus OX=10090 GN=Pax8 PE=1 SV=3
P51974	Paired box protein Pax-8 OS=Rattus norvegicus OX=10116 GN=Pax8 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13358	DDE_3	DDE superfamily endonuclease	Domain	Interproscan
PF00292	PAX	'Paired box' domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001523	Domain	Paired domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR038717	Domain	Tc1-like transposase, DDE domain	Interproscan
IPR043565	Family	PAX family	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45636	PAIRED BOX PROTEIN PAX-6-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23047	UNKL; E3 ubiquitin-protein ligase UNKL	EC:2.3.2.27	Ubiquitin system	ko04121	deepkoala