Gene detail

Detailed information of ANN07192-RA in Leptoseris scabra

Genomic Location: Scaffold_6__1_contigs__length_62720928:5872072...5882308
NR annotation: XP_021366095.1, LOW QUALITY PROTEIN: uncharacterized protein K02A2.6-like [Mizuhopecten yessoensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN07192-RA

ATGAAGAAAACTGAAGACCAGGGAGTTTGTGAAGCTGCAAGTTGGATTTCTACTGAAAGGAGGAAAAAGAAAGCAGACTACCTTGGGATTACACAAAATAATAATGTGAACTCCACTGGGCAAGTACATCCATTCACAAACATGTCAAGTCCTGCAAAGAACACTGTTATCAGTTCAAGTTGTGCACCACCTCAGCTGAGTGCTGATGTACCATCACTGCAAGATGTGCAAACAACAACAAAACTTCCCAAAGATGCTCATCTGCCTGTTGATGTTCTGCTGCTGACAGTGAAGGACTGCGAGTTCGTAGCTTGTTATGGGGAGCTGAAGAACCCTTACAGATGCTGGTTTGAGGGTCTTGGATATGTTTATTTTGAGGAAGTGGATGAAACAGGAAATCAAGAGGAGAAAGTAAAAGTGGCATTGATGAGATGTTGTAAAGGTTCTTGTGGTCCTGGTGGTTCATTGATTTCTATCAAGGATGCTGTCCCTGTGTTAAGACCTAAGGCTGTTATTTCTGTAGGAATATGCAGTGGTCTTAAGCCTGATGAATCCAACTTGGGAGATGTTGTTGTTTCTGCAAAGTTAAGAGAACAATCAACTGGTATGGGAAGCTATGTAAGCAAACGTTTTCTCAATCTCATCAAACATGCAGCTGATGGCTGGGTTCCACCTTTGATGAACCCAGAATCTAGACCAGAAATCAACATACACTGTGACGGTGAGATTTTGAGTGGCCCAGAGCAGGTTAGAGCAAAGTGGCGACGTGAACAACTAACTGCATCCTACCCACAGGCAGCAGCCATTGAATCTGAAGGAGAAGATACGTTTGATGAGAAGACGGGAACTTGGGAGCATTATACGGAGCGCTTAGGACATTATTTTGATGCAAATGGTATCGGCGATGAGTCCCCGGGGGACAAAGCGAAACGGCGAGCGATTCTGTTGAGTGTGTGTGGAAGCAAGACGTACAAGTTGATGTGTGACCTTCTAGCCCCAGCAAAACCGGGAGAAAAATCATACCAGGAACTGGTAAAGCTTATTCAGGATCATTTAGCTCCAAAGCCATTGGAAATTGTACAAAGGTTTAAGTTCAACAACCGTTTTCGCTCCGAAGGAGAATCAGTAGCAGATTTTGTGGCAGCGCTAAGGAATTTGGCCGAACACTGTGAGTATGGAGATACTCTGGAGACAATGCTGAGAGACAGGATTGTGTGTGGAATCCGGGATGAGAAGATACAACGACGTCTGCTTGTGGAAAAGAAATTGACCTTCCAGAAGGCATATGAAATCGCAACCGCCATGGAAGTCACAATGAAAAATATGACAGTGCTTCAGGAATCGAAGGAGTCGGAGTCGGTAAACAAGGTAACGGTACAGGCAGTAGGGACGGCCGGCCGTCGCATACCGCGGAGATCGGTTTGTTTTCGGTGTGGTGGGAACCATAGTGCACAAACATGCCGGTTTAAGGACCTGAACTGTTACTATTGCAAACAAAAAGGCCACATTGCTGACAGGTGTCCAAATCGCAACAAAAATCAGTCGAGAGGTGAAAAGCAAGATTTGCAACCGAACAAAAGTGATCAGAGGGGATATTCTGGCAAGCAGAGGTCAGGTAACTTACACCAGTTAGAGGATGTTGTTAATGTTTTTGATGAGGATGCTGGGGAGGAGGGAGATGTGTATGGCGAGCTGTTTTGTGTGAATTCAAGTAGAGGCCACAACCCTTACAAAGTGACAGTGTTAGTAAATGGAGTGAATGTTACAATGGAAATTGATACTGGGGCCTCAACAACTGTTGTTGATGAGAAAACCTTCCACACTTTGTCTCAGCCGGGTAGAGTGTTGGAACTGAACGCTGTGAATACTGCACTGCGTACCTATACAGGGGAGATGATTCCTGTAGTGGGGGAGTGTGAGTTGGAAGTAGAGTATGATGGTTTTAAAGGCCTTCTACCAGCTGTGGTAATCAGGGGAGAGGGTCCATGTTTGATGGGCCGTAACTGGCTTCAGCACATATCTTTAAATTGGAGTGAAATTTTCCATCTTTCCGCCATGGATAAGGACTTGAATGAGATGTTGGAAACACATGCTCCCATTTTCCAAGAGGGTCTGGGTAAAGTGGCAGGAGTGAAGGCGAAAATCTATGTCGACCCCACGGAGAGGCCTCGATTCCTTAAATCCAGGCCTGTAGCCTATGCCCTGTGTGAAAAAATTAAGCCTTAA

Transcript

ANN07192-RA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13650	Asp_protease_2	Aspartyl protease	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035994	Homologous_superfamily	Nucleoside phosphorylase superfamily	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984	PROTEIN CBG26694	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0009116	Biological Process	nucleoside metabolic process	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan