Gene detail

Detailed information of ANN07273-RA in Leptoseris scabra

Genomic Location: Scaffold_6__1_contigs__length_62720928:7796005...7805387
NR annotation: XP_020609271.1, guanylate-binding protein 1-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN07273-RA

ATGGGATACTTCCCAGGTGGGTCCATAGCTAATATTGTTCATTTACTCCGGTTCTCTGTCATATTAGAAGAAATGGACTTCAGAAGAAAAACCGATATGGCGATCCCACTTTGTCTCCCGAACAACTGCCGCTGGAATTCTGCTACCCGTGAATACAACAAAACAGGGGAAAAGCGCTCATCACTTTACGTCGTAGATGAAGCCCTTCTAAAACTTAGGACGGTGAAAGGTCCTGTATGTGTTGTATCGATCGCTGGCTCATACCGGAAGGGGAAGTCTTACGTTTTAAGCGAAGCTTTTGATCAACCAGAGGTCTTTCCTCTGGGACATCACTTTGACCCTGAAACTATGGGAATCTGGATGTGGATTGTACCGCAAAAGTTTCGGGACTCCAATGGTCGGGAGTGCACTGTTGTGTTACTGGACTCAGAAGGAATTGACGCTGTCAAGGGAGAAGGTTTAGATGACAATCAAATCTTTACGCTGAGTGTTTTACTAGCCTCTGTGCTGATTTATAACTCTTCTGGTGTTCCAACGAGACATGATCTGGATGGATTGGAATATCCTTTTCACCGTATCAAACTTCGTTCGAACAATGGACGAGGTAGCATGGTAGCTCCTCGAGAGGACACCGAGTTCTTCCATAAAACTTTTCCGTTCTTTATATGGCTTCTGAGGGATGTAACACAAGCCATCCCACCTGACTGCAAGGACATCAAAGAGTACTTCTTGACAAGGGTATTTAAAGACCAGGGTAGTTCACGTGGAGATCCAACACAGGAAGTTGCTGAAAGCATTTTGCGTTTCTTTCCCGGATTCCAAGCCTTTAAACTGCCTCCACCCACCGTCGATGATGAAGTGCTAAGAAACATCAACAGCAACAAAAGTCAGTTAAATCCTCGTTTTCTGGAAGGGATAGAGCAATTCAAGCGATTACTGCGATCTATGCTTGCTCCTAAGCACAGCTTTAATGACGGAGAAGTTGTAACTGGTGAAGGCCTTGCTGCCCTGGTCCAACTGTACGTGGAAGCCATCAACACTCCTGGCGTGATCCCTAACGTGCAAACAGCTTGGGAGACATTTGTGGTAACAAAGTGCACAGAGGCCTCTCATGCAGCACTCCAAGTTTATGACGCCACCATGACTGCAGCACTGTCGGACCAGCTTCCTTGTGATAGTGACAAAATTCGACAGAATCATGAACTGGCACTGGAGAAAGGTGTCACTCGGCTGGAAACTGAGACATTTGGAATGTCTGCCATTACAATTGAGAAGTACCTGAGGGAATTGACGGCAACGTTCGACAAAAGGTTGGCTTCGTGGCATTTTGAAAATGAAAAATCAACTCGGGAGGCCTGTACTGTTCTTCTAAAGCAACTAAAGGAGAAACACTTGGATCCAGTCCTTGCTCGGCTACACGGAGAGGAGGGGGCCAGGGTATCGTTTGAAGACATTATACACGGATACAAAGGGATTGAAGAGGACTACAAGGTCCGTGCCGTTGGAGCTAAAGATGTCTGCGCCTCGGTGTTCTTCGAATTTCATCCGGTACTAATGGAAGAAATGCAGGGTTATCTGGGAGTGCTGCGACAACTGAAGGACTTCGACGAAAACTTAACTCGAGAAATTGCAGCCAGAGCCTATCAAGAGCAGGAAAAGATGAAGCTTGAGGAGGAGCACGCCCGACTCCAGCAAGAAAACAGAGAAAGGCAGATGGAGATGGAGAAGCTACACGAAAAATTTGCAGATGAAAGGAAAAGACTCCGTGAGCAGATGGAAGCAGATACCAAGGCTCAACAAGAGCAAATGGAGAACATGATGAAGGCAAGCATGAAGAGGGCTGAAGAAGATCGAAAAGCTTTCATGCAAGAAAACCAAGCGCTTAACGCAAGTCTCGGGGAAATGCAAAGGTCGAATGACGAAATGCAGCAAACGATTGCAGGATTGGAACAACAGCTAATGCAGAACAGAGAAAGACAGGATGAAGTAAGGAAGCCAGGATTCTTTAACAAAGCGCTGAAGGTTGTGGATGGAGTGGCGGACGTGGCGGTAAAAGTGGCAGGTGCCCTGGCTTTGGCGCCCAAGTGTAGTGTTATGTAA

Transcript

ANN07273-RA

Protein

Uniprot

Uniprot term	Description
Q58D72	Atlastin-1 OS=Bos taurus OX=9913 GN=ATL1 PE=2 SV=2
Q60HD2	Atlastin-1 OS=Macaca fascicularis OX=9541 GN=ATL1 PE=2 SV=1
Q8BH66	Atlastin-1 OS=Mus musculus OX=10090 GN=Atl1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02263	GBP	Guanylate-binding protein, N-terminal domain	Domain	Interproscan
PF02841	GBP_C	Guanylate-binding protein, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015894	Domain	Guanylate-binding protein, N-terminal	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003191	Domain	Guanylate-binding protein/Atlastin, C-terminal	Interproscan
IPR036543	Homologous_superfamily	Guanylate-binding protein, C-terminal domain superfamily	Interproscan
IPR030386	Domain	GB1/RHD3-type guanine nucleotide-binding (G) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10751	GUANYLATE BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan