Detailed information of ANN07321-RA in Leptoseris scabra

Genomic Location: Scaffold_6__1_contigs__length_62720928:8815766...8831433
NR annotation: CAH3045015.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4KLQ5WD repeat-containing protein 76 OS=Xenopus laevis OX=8355 GN=wdr76 PE=2 SV=1
B2KIQ4WD repeat-containing protein 76 OS=Rhinolophus ferrumequinum OX=59479 GN=WDR76 PE=3 SV=2
Q7S1H9DNA damage-binding protein cmr1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=NCU09302 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003214 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR050853
all species →		FamilyWD repeat-containing DNA damage-binding proteinInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14773
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:2000001
all species →		Biological Processregulation of DNA damage checkpointInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K24755WDR76, CMR1; WD repeat-containing protein 76-DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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