Genomic Location: Scaffold_6__1_contigs__length_62720928:10338742...10355368
NR annotation: MCT4603087.1, reverse transcriptase domain-containing protein [Marinifilum sp.]
| CDS | ||||
| ANN07397-RA | ||||
| Transcript |
| ANN07397-RA |
| Protein |
| ANN07397-RA |
| Uniprot term | Description |
|---|---|
| O00370 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 |
| P08548 | LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1 |
| P11369 | LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13966 | zf-RVT | zinc-binding in reverse transcriptase | Domain | Interproscan |
| PF01400 | Astacin | Astacin (Peptidase family M12A) | Domain | Interproscan |
| PF00629 | MAM | MAM domain, meprin/A5/mu | Domain | Interproscan |
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR034035 | Domain | Astacin-like metallopeptidase domain | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR000998 | Domain | MAM domain | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR000884 | Repeat | Thrombospondin type-1 (TSP1) repeat | Interproscan |
| IPR001506 | Domain | Peptidase M12A | Interproscan |
| IPR026960 | Domain | Reverse transcriptase zinc-binding domain | Interproscan |
| IPR024079 | Homologous_superfamily | Metallopeptidase, catalytic domain superfamily | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR052343 | Family | Diverse Retrotransposon and Effector-Associated Protein | Interproscan |
| IPR006026 | Domain | Peptidase, metallopeptidase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46890 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004222 | Molecular Function | metalloendopeptidase activity | Interproscan |
| GO:0006508 | Biological Process | proteolysis | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0008237 | Molecular Function | metallopeptidase activity | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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