Detailed information of ANN07469-RA in Leptoseris scabra

Genomic Location: Scaffold_6__1_contigs__length_62720928:11744171...11750718
NR annotation: KAJ7383552.1, hypothetical protein OS493_027215, partial [Desmophyllum pertusum]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003264 (this species only)
Ubiquitin familyE3|E3 activity RING|U-box · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04564
all species →
U-boxU-box domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR052085
all species →
FamilyWD repeat, SAM and U-box domain-containingInterproscan
IPR003613
all species →
DomainU-box domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46573
all species →
WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →
Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567
all species →
Biological Processprotein ubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN07469-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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