Gene detail

Detailed information of ANN07693-RA in Leptoseris scabra

Genomic Location: Scaffold_6__1_contigs__length_62720928:19131427...19145829
NR annotation: CAH3153941.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9VQG2	Gamma-secretase subunit Aph-1 OS=Drosophila melanogaster OX=7227 GN=aph-1 PE=1 SV=1
Q8BVF7	Gamma-secretase subunit APH-1A OS=Mus musculus OX=10090 GN=Aph1a PE=1 SV=2
Q96BI3	Gamma-secretase subunit APH-1A OS=Homo sapiens OX=9606 GN=APH1A PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009170 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06105 all species →	Aph-1	Aph-1 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009294 all species →	Family	Gamma-secretase subunit Aph-1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12889 all species →	GAMMA-SECRETASE SUBUNIT APH-1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016485 all species →	Biological Process	protein processing	Interproscan
GO:0043085 all species →	Biological Process	positive regulation of catalytic activity	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan
GO:0030674 all species →	Molecular Function	protein-macromolecule adaptor activity	Interproscan
GO:0070765 all species →	Cellular Component	gamma-secretase complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06172	APH1; gamma-secretase subunit APH-1	-	Alzheimer disease	ko05010	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.