Detailed information of ANN07728-RA in Nanomia septata

Genomic Location: chr4:20361233...20380887
NR annotation: XP_047137086.1, mucin-2 isoform X4 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2PC93SCO-spondin OS=Gallus gallus OX=9031 GN=SSPO PE=2 SV=1
Q700K0SCO-spondin OS=Rattus norvegicus OX=10116 GN=Sspo PE=2 SV=1
A2VEC9SCO-spondin OS=Homo sapiens OX=9606 GN=SSPOP PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08742C8C8 domainDomainInterproscan
PF00094VWDvon Willebrand factor type D domainDomainInterproscan
PF01826TILTrypsin Inhibitor like cysteine rich domainDomainInterproscan
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00093VWCvon Willebrand factor type C domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014853DomainVWF/SSPO/Zonadhesin-like, cysteine-rich domainInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR036084Homologous_superfamilySerine protease inhibitor-like superfamilyInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR050780FamilyMucin/von Willebrand/Thrombospondin superfamilyInterproscan
IPR001007DomainVWFC domainInterproscan
IPR002919DomainTrypsin Inhibitor-like, cysteine rich domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11339EXTRACELLULAR MATRIX GLYCOPROTEIN RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan

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