Detailed information of ANN080811-RA in Nanomia septata

Genomic Location: chr6:166923232...166925860
NR annotation: XP_009019636.1, hypothetical protein HELRODRAFT_142999, partial [Helobdella robusta]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q27350Protein sine oculis OS=Drosophila melanogaster OX=7227 GN=so PE=2 SV=1
Q62232Homeobox protein SIX2 OS=Mus musculus OX=10090 GN=Six2 PE=1 SV=2
Q6DHF9Homeobox protein six1a OS=Danio rerio OX=7955 GN=six1a PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16878SIX1_SDTranscriptional regulator, SIX1, N-terminal SD domainDomainInterproscan
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR031701DomainHomeobox protein SIX1, N-terminal SD domainInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10390HOMEOBOX PROTEIN SIXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

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