Gene detail

Detailed information of ANN08537-RA in Leptoseris scabra

Genomic Location: Scaffold_6__1_contigs__length_62720928:33875785...33880159
NR annotation: KAJ7385017.1, hypothetical protein OS493_018706 [Desmophyllum pertusum]
Species abbreviation LSCAB · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2KHY5	Fanconi anemia core complex-associated protein 24 OS=Bos taurus OX=9913 GN=FAAP24 PE=2 SV=1
Q8BHL6	Fanconi anemia core complex-associated protein 24 OS=Mus musculus OX=10090 GN=Faap24 PE=2 SV=1
Q9BTP7	Fanconi anemia core complex-associated protein 24 OS=Homo sapiens OX=9606 GN=FAAP24 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003635 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14520 all species →	HHH_5	Helix-hairpin-helix domain	Domain	Interproscan
PF17949 all species →	PND	FANCM pseudonuclease domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040646 all species →	Domain	Fanconi anemia core complex-associated protein 24, pseudonuclease domain	Interproscan
IPR010994 all species →	Homologous_superfamily	RuvA domain 2-like	Interproscan
IPR026985 all species →	Family	Fanconi anemia-associated protein of 24kDa	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31786 all species →	FANCONI ANEMIA CORE COMPLEX-ASSOCIATED PROTEIN 24	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0036297 all species →	Biological Process	interstrand cross-link repair	Interproscan
GO:0043240 all species →	Cellular Component	Fanconi anaemia nuclear complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10898	FAAP24; fanconi anemia-associated protein	-	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.