Gene detail

Detailed information of ANN08570-RA in Leptoseris scabra

Genomic Location: Scaffold_6__1_contigs__length_62720928:34587295...34595721
NR annotation: XP_029184841.2, melatonin receptor type 1A-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN08570-RA

ATGTCTCAATTCTTGCTTCCTCCAAGAAGCGCTGGACTGGTCGTTTTTGAGTCCGTGGCATCCATCGCGCTTGTCGTCCTCGCCGTGATCGGCAATGTTTTTATTTTAGTCGCGCTCCATCGAAATCCGCGTCTACGGAACTCCACGAATGTGTACATCGCTGCTTTGGCGATCACCGATCTCTTAAATGCTTGTATCCCGGGAACACTGTTTGCAAGCACTGTGGTGTCAGGAAGACTTGTGTTCGGTCTGGCCACCTGTCGCCTGAGTGGTTTCCTTGTACACTTCCTGACTTGTGTCTCCATGTCGACGATGGCGTTGACCGCGATAAACAGGTACTTTCGAGTTGTTCAACAACAGCACTACAAGAAGTTGTTTGGTGGCAAACGTTCGCTATTCATGCTGGTTTTCCTGTGGCTTGTTATCGCCAGCTTCGTTCTCTATCCCACAGTTGTTGGTGTGGGAGAGTTTAATTTCAATCCCGCCTTGTCGTTGTGCGCCTACACCTTTAAGAGCCCGGGAGCAGAAACAGCCTTCACCCTGATGGTCGTATTCATTTTCTTTCTTTGTTGCCTGTTACTGGTTTCTTTTTCTTACTACCACGTGTCAAAAACGATCCGTGAACATAACACTGGAGTGTCTAGTTCCCTGAATGGTGTTAGTGTACAGGAAATCAACCTGTCCAAACTGCTATTCATCCTGTTATTTGCCTTTACTCTTTGTTGGCTTCCCACGTTTGTGATCATACTGATCATTAGGGTCATCATACACAACGCCCCGCACGCATTGGGTGTGGTGATACCGTTTTTGCTCCAGACGTCCAGCGTTCTAAATCCATTTATTTATGGTGCCTTGAGTCCCCCTTTCAAACGATTACATGCCTCGCTGGCTCGCAGATTGTCAAGACCCGTTGTCATCCCGAGTGTCTTGCCTTGGTACCAGCAAAACCGTTTGTTATTGGAAACAGTCGACAATAGGAAGCGAAACGGAGCAATGTCTCAATTCTTGCTTCCTCCAAGAAGCGCTGGACTGGTCGTTTTTGAGTCCGTGGCATCCATCGCGCTTATCGTCCTTGCCGTAATCGGCAATGCTTTCATTTTAGTCGCGCTCCATCGAAATCCGCGTCTACGGAACTCCACGAATGTGTACATCGCTGCTCTGGCGGTCACCGATCTCTTAAATGCTTGTATCCCGGGAACACTGTTTGCAAGCACTGTGGTGTCAGGAAGACTTGTGTTCAGCCTGGCCGCCTGTCGCCTTAGTGGTTTCCTTGTACACTTCCTGACTTTCGTCTCCATATCGACGATGGCGTTGACCGCGATAAACAGGTACTTTCGAGTTGTTCAGCAAAAGCACTACAAGAAGTTGTTTGGTGGCAAGCGTTCGCTGTTTATGGTGGTTGTCTTGTGGCTTGTTATTGCCTTCTTCGTTCTCTATCCCACAGTTGCTGGTGTGGGAGAGTTTAATTTCAATCCAGCCTTGTCGTTTTGTGCCTACGCCTTTACCAGCCCGGGAGCAGAAGCAACCTTCACCCTGATGGTGATATTCATTTTCTTCCTTTGTTGCCTGTTACTGGTTTGCTTCTCTTACTACCACGTGTCAAAAACGATCCGTGAACATAACACTGGAGTGTCTAGTTCCCTGAATGGTGTCAGTGTCCAGGAAATCAACCTGTCCAAAGTGCTCTTCATCCTGGTGTTTGCCTTTACTCTTTGTTGGCTCCCCACGTTTGTGATCATACTGCTCATTAGGGTCATCATACACAAGGCCCCGCACGCATTGTGTGTGGTGATACCGTTTTTGCTCCAGACGTCCAGTGTTCTCAATCCATTTATTTATGGTGCCTTGAGTCCCCCTTTCAAACGCGAGTTTCGCCGACTGTTGATGTTTCACTGTGTGAACCTATCCGATGAAAGCCAGATGAACCAAGTCCAGGGAAAAGTCTCTATCCAGCCGCAAACCGATATTGTTTATCCCACGCCAGATGGGACAAGCAATGAATATCATTCCCAGCAACCAGTGCCTGCTTGGCCGTCATAG

Transcript

ANN08570-RA

Protein

Uniprot

Uniprot term	Description
O16005	Rhodopsin OS=Sepia officinalis OX=6610 GN=RHO PE=2 SV=1
O70528	5-hydroxytryptamine receptor 4 OS=Cavia porcellus OX=10141 GN=HTR4 PE=2 SV=1
P43141	Beta-4C adrenergic receptor OS=Meleagris gallopavo OX=9103 GN=ADRB4C PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24228	B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan