Gene detail

Detailed information of ANN08955-RA in Leptoseris scabra

Genomic Location: Scaffold_6__1_contigs__length_62720928:42120956...42130733
NR annotation: CAH3190268.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN08955-RA

ATGGCTCAAAGTAGAAGCTTTTTCGATGATGTGAAAAAGGAATTAGACTGCTCCGTGTGCCAAGAGCAGTTTAGTGAGATTAAAGAACCGAAGATACTAAAATGTCTTCACACCTTCTGTAAGACGTGTTTGGAAGCTTGGTTGCGACAGCATCGTGAAGGAGAATTGAGTTGCCCGACGTGCCGTCATATCACCGAATGTCCTAACAACGACATAAACAGGTTGCCGTCTAACTTGTTTTACAAGCAGTTGGTCGAAATTGTGGAGGCTTACAGCGGACAAGGGCAAGAAGATTCACCACAGTGTGGCAACTGCGACGAAAGGAAATCTTTGAAATTTTATTGTTCTGATTGCAACAGCTTCTTGTGTGATGACTGCGCTAGGGTCCATATGAAAGTAAAACTTTTTAGAAGTCACAATGTTAAAGAAATGAAAAACTTTGAGTCGAGTGATGTGCAAGACTACGCTCGAAGAGCGAACGTTTGTAAGAAACACAAAGATGAAGTTCGTTTTCTCTGCTTACATTGCCAAATTTGCATTTGCCGTGACTGCGCCATATTAGAACATCAAGATCATAAGAAACTCTCGCTTGATCAAGGTCTCGAAAACATTCAACCCGACATCGAGGCCAAAATTCGCGAGGTTCAAGCAAATGGAATTCGTTTGAAGACTCAGAAAGAAACAATGGAGAAAAGAAAACTAAAGTTAAGCAGCGACATCGAAGAAGCGACAAGAGAAGTGAAGCGAGTCGCTGAACGTTGCATTTTACTGATTCGCAAGCATGAAGCGAGCGTGACGGAAAGTTTAGAAAAGCAGAAAGGAGCTGTTCAAGATGGCTTTGCAGCCCAGAATACCAGTCTGGAGAATAAAATGATGGAGATTGAGAGCACATTGGCATTTTGCGAGGAAGTTCTTCGTCGAAAGAATTTACCAGAAATTTTGAACGTCAAAGCATTGATTGAACAGAGGCTTCAGGAACTGTCCGTATCGGGTTCTGAGAACATGCCAAAGCTGGACTTTTCTGTTGTCAAGTATGTTCCAAACGACCTTGGTTTTCTGAAAGACGCACCAGGAAAGCTAATCACCAGCAACACCGAGCCTTTATTGTCAGTGGCGGAAGGGAAAGGTCTCATCGAAGGAACAGTGGGCGACGATTGCAGTTTTACAGTAATTACAAAGAATTCAGCGGGCAACACAACTTACAGTGAGATAGACGAAGTGAATGTTGCAATCATATCACTGGCGAATCGAGTAAACGACGTTAAGTTCGTTAAGACGGACTTGAAGGATGGCCGTTACTCAGTTTCCTACAGACCAACGACCCCTGGTGAATTCACTGTGTCTGTTGAAGTTGCAGGGACCGCCATTATGGGGAGTCCATTCACACTGCAAGTAAGAAGAAGGACATCAGCACCAAAGAAAAAGCCGGTAAGACGAAACAAGGGTACGCCCGGCAGCAGCTCTACAGCAGAGATGGAAGACCGAATGAAGGAAGGTGAACACGAACGCAAGAGAGCTGAGGCGCTTACAAAAGATATCCAGTGGATGCATACTGACCGTGTTGGTGCAGATGTCTTCGCAGAATTCGACCCGCTTGTAAACGCAAAGATTGAAGCTGCCTACGACGAGAAGAAAGCTGTAGTTGTTATAGCGGATGGCGAACACCATCACCAAATAGACTTCCGTTCGATGACTGCGAAGGACATGAGTGGCATTGACATCGCTGATTTTCAAAGAATTGACCGTAGAGTTGTCCTTCTTCCAAATTACTGGACTCCTCAGCCAAAAGATCACAACGGTAAAGAGAAGACAGTACATCTCTATCAGCTTGATCCAAACGTTGATTCAAAGGAGTACCGAAGAGTAGAGAGTCGTTTCAAGAAATCATGCAGTAATCATATTGTTAAGATAGAGCGACTTCAAAACCCAGATCTGTACCGAACATACACGATCCGAAAACAAACGATGGACCAGGCAAATGGAAGCAATGAACAGTGGCTATTTCACGGAACTCCTGAGGAATTCTGCCAGCGTATAAATCACGCTGGCTTCAACAGAAGCTTTCATGGCAAGAACGCGAAATTATATGGAAATGGAGTATATTTCGCTTTAAATGCATTCGCCTCAGCCGTGTCCACGGTTTCCCCGGACGTGCTCGGATTGAAATACATGTACCTGACAAGAGTCCTGGTTGGTGAGTACACACAAGGAAGACCAGGTCTTCTAACTCCACCAGCAAAGAACGTGATGGATCCAGCAGACACCTATGATTCTGTGGTCGATCAGATTCGTAATCCCCAGATCTTCGTTGTGTTCTACGACTGGCAGTGTTATCCTGAGTACTTAATCACCTTTAAGTGA

Transcript

ANN08955-RA

Protein

Uniprot

Gene family

Uniprot term	Description
Q460N5	Protein mono-ADP-ribosyltransferase PARP14 OS=Homo sapiens OX=9606 GN=PARP14 PE=1 SV=3
Q2EMV9	Protein mono-ADP-ribosyltransferase PARP14 OS=Mus musculus OX=10090 GN=Parp14 PE=1 SV=3
Q460N3	Protein mono-ADP-ribosyltransferase PARP15 OS=Homo sapiens OX=9606 GN=PARP15 PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13639	zf-RING_2	Ring finger domain	Domain	Interproscan
PF00643	zf-B_box	B-box zinc finger	Domain	Interproscan
PF00630	Filamin	Filamin/ABP280 repeat	Domain	Interproscan
PF02825	WWE	WWE domain	Family	Interproscan
PF00644	PARP	Poly(ADP-ribose) polymerase catalytic domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR037197	Homologous_superfamily	WWE domain superfamily	Interproscan
IPR052056	Family	Mono-ADP-ribosyltransferase ARTD/PARP	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR001298	Repeat	Filamin/ABP280 repeat	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR000315	Domain	B-box-type zinc finger	Interproscan
IPR017868	Repeat	Filamin/ABP280 repeat-like	Interproscan
IPR004170	Domain	WWE domain	Interproscan
IPR012317	Domain	Poly(ADP-ribose) polymerase, catalytic domain	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14453	PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003714	Molecular Function	transcription corepressor activity	Interproscan
GO:0003950	Molecular Function	NAD+-protein poly-ADP-ribosyltransferase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0010629	Biological Process	negative regulation of gene expression	Interproscan
GO:0070212	Biological Process	protein poly-ADP-ribosylation	Interproscan
GO:0140289	Biological Process	obsolete protein mono-ADP-ribosylation	Interproscan
GO:1990404	Molecular Function	NAD+-protein ADP-ribosyltransferase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan