Detailed information of ANN09074-RA in Leptoseris scabra

Genomic Location: Scaffold_6__1_contigs__length_62720928:44747410...44751314
NR annotation: XP_029192824.2, probable sodium/metabolite cotransporter BASS4, chloroplastic [Acropora millepora]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B8AJ09Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=BASS4 PE=3 SV=1
Q6ESG1Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BASS4 PE=3 SV=1
F4IZC4Probable sodium/metabolite cotransporter BASS4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BASS4 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001732 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13593
all species →		SBF_likeSBF-like CPA transporter family (DUF4137)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016833
all species →		FamilyPutative sodium bile acid cotransporterInterproscan
IPR038770
all species →		Homologous_superfamilySodium/solute symporter superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18640
all species →		SOLUTE CARRIER FAMILY 10 MEMBER 7Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0009941
all species →		Cellular Componentchloroplast envelopeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14347SLC10A7, P7; solute carrier family 10 (sodium/bile acid cotransporter), member 7-Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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