Genomic Location: chr4:111331053...111333389
NR annotation: PIK57781.1, hypothetical protein BSL78_05307 [Apostichopus japonicus]
| CDS | ||||
| ANN09126-RA | ||||
| Transcript |
| ANN09126-RA |
| Protein |
| ANN09126-RA |
| Uniprot term | Description |
|---|---|
| P04146 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 |
| P10978 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00665 | rve | Integrase core domain | Domain | Interproscan |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR001584 | Domain | Integrase, catalytic core | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR025724 | Domain | GAG-pre-integrase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR42648 | TRANSPOSASE, PUTATIVE-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0015074 | Biological Process | DNA integration | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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