Detailed information of ANN09342-RA in Montipora grisea

Genomic Location: Scaffold_2__1_contigs__length_55682999:44008219...44104664
NR annotation: XP_015751030.1, PREDICTED: fibrillin-2-like [Acropora digitifera]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B5DFC9Nidogen-2 OS=Rattus norvegicus OX=10116 GN=Nid2 PE=2 SV=1
O88322Nidogen-2 OS=Mus musculus OX=10090 GN=Nid2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009526 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12947
all species →		EGF_3EGF domainDomainInterproscan
PF07645
all species →		EGF_CACalcium-binding EGF domainDomainInterproscan
PF12662
all species →		cEGFComplement Clr-like EGF-likeDomainInterproscan
PF12946
all species →		EGF_MSP1_1MSP1 EGF domain 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR009030
all species →		Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR024731
all species →		DomainEGF domainInterproscan
IPR049883
all species →		DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR026823
all species →		DomainComplement Clr-like EGF domainInterproscan
IPR024730
all species →		DomainMerozoite surface protein, EGF domain 1Interproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24039
all species →		FIBRILLIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02599NOTCH1; Notch 1-Endocrine resistanceko01522deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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