Gene detail

Detailed information of ANN09382-RA in Leptoseris scabra

Genomic Location: Scaffold_6__1_contigs__length_62720928:52205399...52236525
NR annotation: XP_020623951.1, 5-oxoprolinase-like [Orbicella faveolata]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN09382-RA

ATGGATCGCGCCAGCAAGCATTGCCTCCGAGCAAGAATAAACATCTGCCACGACCACATCAAAACATCAAAGGACAACATTAAAAACACCAAACGCGAACTGTCCTCTCTGATCAACGAGGACACCTACTCGACTTTAATGTCGTTCCTGAAAAGCAGAGCAACATCTTTCCACAATAACATCAATGTCAGACATGCCAAGAAACTCGCTAACTTGAATAGTACTGGTTCCCAAAAAGCCGACATCGACAAGAACAACTGGGTTGTAAACCTCTCCAAGAAACCCCTTTTACCAGAAGAACGATCTCTCTTGGAGAAAGGCCCAAAGTTTGCCCCAACGCCAACTAACATACCACATAAGAACATTGTGGCTGAAATTGAAGCTGCCATCCGCCACCTACCTGATGATTCCAAAGATGCAGTTAGAACAAGTTCTGCTGCCGTTCTTCATAGGGCACGACTACCGATACACAATAATGTATCCAAAGAGGAAAGAAAAGCCTTAAATAACCTTAAGAAAGACCAATCCAGAGTTGTAATGAAGGCCAATAAGGGGAACTGTTTTGTCGTCATGGATAGATCAGACTACGACAGCAAGATGGAAACCTTACTCAACGACAGATCCACCTATGAAGTGGTTTCCACATCTCCTTTCCGCCGAATTGAACGTGAACTGAACGCCTTGCTTCTTTCCTTAAAGAGAAAACAAAAGATAGATGAACCAACATACCGCAAACTTCACTCAACTGATGGCATACCACCAGCGATTCGCGGTTCTGTTAAGCACCATAAAGATGGGAACCCTCTGAGGCCCATCGTCACCTGTATTGGCTCAACACTTTACAACACGTCCAAATTCCTAACGGATATCCTTTCTCCGCTTCAAAATCGTAACGGATACTCTGTTGCTAACTCCTTACAGTTTTCCAAAGAATTATCTGATATCGAAATTGATGACAATGAAGTTTTGGTCTCTTTTGATGTCGTATCATTGTTCACCGCAATTCCTGTAGATAAAGCGTGTGATTATATAAAAAAGAAACTTGAACAAGATGCTACTCTTTCTTCAAGGACAAACTTAGACATTGATGACATCACCGCACTTCTACAATTCACCTTGTCCAACAACTATTTTGTATTCAATGACAGAATTTACAAACAAGTCCATGGCTGTGCGATGGGCAGTCCTGTCAGCCCCGTTGTAGCCAATCTCTGCATGGAGGAGATCGAAGAGTCCGCAATCAGCAATTCATCCGTTCCCCCCAAAATTTGGAAACGATATGTTGACGACAGTTTTTGTATCATTACAAGAGACGACGTCTCAGCCTTCCATGACACATTAAATTCAATTGATACAAACATCTCGTTTACCATCGAGACCGAATGTAACGGAAAGATTCCCTTTCTCGACACTCTGGTCTCCCGTAGAAATGGAGTCATCGCTGTTGATGTTTACAGAAAGCCCACCCATACAGACAGACACTTAGACTTTAATTCCCATCATGACAGTCAACACAAGGCCAGCACAGCATCAACTCTTCTGCACAGAGCCCTAAATCTACCCAATTCCTCCGAAGGAAAAAAGCGGGAGCTTAATTATGTCCATGCAGCTCTGGAGTCAAACGGTTATCCACCTAAGTTTATCCAAAACATACAGGCTAAAAAAACCCGATCCTCGACAACAAATGTATCCCCAGAGGAACTTGTTGGAATGTTTTTTAAGATGGTCGAACCAACCGAATCACGCAAGTCTTTCGCTTCTCTCCCTTACATCAAAGGAGTAACTGAACCTTTGACACGAACATCAACTGATGTCTCTCGTTATGCTGGTCAGTATGAGCAAGTGTTTGAAACAACAACTGCTGGAATTACTATACAGGCACCCCAGCTGGATATCAACACTGTTGCAGCAGGGGGTGGCTCACGCCTGTTTTTTAGGGCAGGGCTGTTTGTTGTGGGACCAGAGTCAGCTGGCGCCCATCCAGGACCAGTATGTTACAGGAAAGGTGGGCCTTTGACAGTTACTGATGCAAACTTAGTTCTTGGACGAATACTTCCCGAATTCTTTCCCAAGATCTTTGGAGAAGATGAGAATCTTCCATTGGACAGACAGGGAACTTTATGTGCTTTTGAGAAAATTACTGAGGAGATAAATACACTTCTGTCCGTTCAAAATACGGACACCAGAAAGGATCCTTTGAGCATAGAAGAGGTTGCCATGGGTTTTATTTCTGTAGCTAATGAGACAATGTGCCGACCTATTAGAGCTTTGACTCAGGCGAGAGGGCACAACACTGCAAATCATGTGCTGGCATGTTTTGGAGGAGCTGGTGGCCAACATGCATGTTCCATAGCCCAATCATTAGGAATGTCAACAGTCTTTATTCACCGCTACTCAGGAATCCTTTCTGCCTTTGGACTGGCTCTAGCAGATGTTGTATATGAAGCTCAAGAGCCTTGCTCCTGTGTTTATAACAAAGATTCGTACCAGTACCTTGATGATCGAATTGCCTTCCTAACCCAGCAGTGCACTGAAGAACTCAAAACGCAAGGGTTTGATGAATGCCAGATATCCACTGAAACATTTCTGCATATGAGATATGATGGAACAGACTGTGCTTTGATATGCAATGTTTCTCCTTGCCATGCAGAAGAGCTGTTGCAGAAAAATTCTCATTGGGCTGACTTTGGAAAGGTTTTCACAGAGAGGTATTTGCAAGAGTTTGGCTTTACCATTCCCAATCGCAACATTATGGTTGACGACATAAGGGTGAGAGGGTGTGGACATTCCAGAACATCATTCCTTCATAATGTAGCTCAGTCAAGTGCCCCACCACCAGTTAAAAAAGTAGCAAAGTGTTTTTTTGAGAGTGGCTTCCTTGACACCAGAGTGTATTCTCTAAATGATCTAGCTGCGGGACATATGATAGAGGGACCTGCTATTATCATAGACCAACACAGCACAATCCTTGTTGAACCACAGTGTATAGCTTCTATTACGAAGTCTGGAGATATCAGAATTGAGATTGGAAAGAACAAAAATAGAAAACAAGTTTCAACAGATCTGGATGCTATACAACTTTCCATATTCTCACATCGTTTCATGAGCATAACCGACCAAATGGGAAGGGTTCTTCAAAGAACAGCAATTTCCACTAACATCAAGGAAAGACTAGATTTCTCCTGTGCAATGTTTGGACCCACTGGTGGGCTTGTAGCAAATGGTCCACATGTACCAATGCATCTCGGATCAATGCAAGAAACAGTGAAATATCAGATTGAGCAGTTAGGTGACAGTTTGAAAGAAGGGGATGTCTTACTAAGTAACCACCCGAGTGCTGGAGGGACACATCTGCCAGATCTTACTGTCATCACCCCGGTCTTTTATCCTGGACAACCCAATCCTGTCTTTTTTGTGGCAAGTCGAGGTCATCATGCCGATGTTGGAGGAATAGCACCTGGCTCAATGCCACCAAATTCTCACAGTATCGTTGATGAGGGTGCTGTCTTTATGTCGTTTAAACTGGTAGACGGTGGGATTTTCCAGGAAGAAGTTCTGAAGGAAAAACTCCTGGCGCCCGCCCAGTATCCTGGCTGTAGCGGCAGTCGTAACATACAGGACAACATCTCCGATCTCAAAGCACAGGTGGCTGCTAATCATAAGGGAATCAAGCTGATAAACTCCTTGATAGATGAGTACAGTCTTCCTGTTGTACACGCATATATGGAATACATTCAGCAAAATGCAGAATTGGCAGTAAGGGAAATGTTAACTGAGATTGCTCAGAAAACCAAGAAACGAACAGGAAAGTCAGTATTGCAAGGTGTGGATCACATGGACGATGGAACCCCGATCAATCTGACAGTTTTTATTGATGAAGACAAGGGCGATGCAGTGTTTGATTTTACAGGAACAGGTTATGAGTCTCATGGCAACTGTAATGCCCCACGTGCCGTTGCCCTTTCTGCTCTTATCTACTGTCTACGCAGCATGGTTAAACATGACATTCCTCTCAATCAGGGATGTCTTGTACCAGTCAAACTTCACATTCCTCCTGGAAGCCTCTTGGATCCATCATCGTCTGCAGCAGTTGTTGGTGGCAGTGTCCTGACCACACAAAGAATTGTGGATGTTGTTCTGAAAGCTTTTGGTGCCTGTGCTGCCTCACAGGGCTGTATGAATAACATCACATTTGGCGATGAAGGATGCGGGTATTACGAAACTGTAGCTGGTGGAGCAGGAGCAGGTCCCACGTGGGAGGGACGGAGTGGCGTCCATAGTCACATGACAAACACAAGAATAACAGACCCCGAGATTATAGAGAGAAGGTATCCTGTTCTTTTAGTTCGTTTTCATCTTAATCCCGGCACCGGAGGAGATGGTTTCCACAGGGGAGGGGATGGAGTAGTTCGAGAATTGGTATTTAGAAGGAATCAAGTATTGTCCGTTTTATGTGAGCGGAGGTCAGCTTTCCAGCCTTATGGGCTTCAGGGTAAGTGGCTTTCTTTGCAGTAG

Transcript

ANN09382-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q75WB5	5-oxoprolinase OS=Bos taurus OX=9913 GN=OPLAH PE=1 SV=2
P97608	5-oxoprolinase OS=Rattus norvegicus OX=10116 GN=Oplah PE=1 SV=2
Q8K010	5-oxoprolinase OS=Mus musculus OX=10090 GN=Oplah PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001799 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01968 all species →	Hydantoinase_A	Hydantoinase/oxoprolinase	Family	Interproscan
PF19278 all species →	Hydant_A_C	Hydantoinase/oxoprolinase C-terminal domain	Domain	Interproscan
PF02538 all species →	Hydantoinase_B	Hydantoinase B/oxoprolinase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002821 all species →	Domain	Hydantoinase A/oxoprolinase	Interproscan
IPR045079 all species →	Family	Oxoprolinase family	Interproscan
IPR049517 all species →	Domain	Acetophenone carboxylase-like, C-terminal domain	Interproscan
IPR003692 all species →	Domain	Hydantoinase B/oxoprolinase	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11365 all species →	5-OXOPROLINASE RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006749 all species →	Biological Process	glutathione metabolic process	Interproscan
GO:0017168 all species →	Molecular Function	5-oxoprolinase (ATP-hydrolyzing) activity	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01469	OPLAH, OXP1, oplAH; 5-oxoprolinase (ATP-hydrolysing)	EC:3.5.2.9	Glutathione metabolism	ko00480	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.