Detailed information of ANN09403-RA in Leptoseris scabra

Genomic Location: Scaffold_6__1_contigs__length_62720928:52558460...52574416
NR annotation: CAH3139908.1, unnamed protein product [Porites lobata]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004445 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05253
all species →		zf-U11-48KU11-48K-like CHHC zinc fingerDomainInterproscan
PF00035
all species →		dsrmDouble-stranded RNA binding motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022776
all species →		DomainTRM13/UPF0224 family, U11-48K-like CHHC zinc finger domainInterproscan
IPR014720
all species →		DomainDouble-stranded RNA-binding domainInterproscan
IPR051591
all species →		FamilyUPF0224 (FAM112) RNA ProcessingInterproscan
IPR036236
all species →		Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21402
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for ANN09403-RA. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN09403-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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