Gene detail

Detailed information of ANN09453-RA in Leptoseris scabra

Genomic Location: Scaffold_6__1_contigs__length_62720928:53481521...53486332
NR annotation: CAH3139585.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q339W7	Probable chromo domain-containing protein LHP1 OS=Oryza sativa subsp. japonica OX=39947 GN=LHP1 PE=2 SV=1
Q946J8	Chromo domain-containing protein LHP1 OS=Arabidopsis thaliana OX=3702 GN=LHP1 PE=1 SV=2
P05205	Heterochromatin protein 1 OS=Drosophila melanogaster OX=7227 GN=Su(var)205 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00385	Chromo	Chromo (CHRromatin Organisation MOdifier) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000953	Domain	Chromo/chromo shadow domain	Interproscan
IPR023780	Domain	Chromo domain	Interproscan
IPR023779	Conserved_site	Chromo domain, conserved site	Interproscan
IPR017984	Domain	Chromo domain subgroup	Interproscan
IPR016197	Homologous_superfamily	Chromo-like domain superfamily	Interproscan
IPR051219	Family	Heterochromatin-associated chromo domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22812	CHROMOBOX PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000122	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0003682	Molecular Function	chromatin binding	Interproscan
GO:0005721	Cellular Component	pericentric heterochromatin	Interproscan
GO:0006325	Biological Process	chromatin organization	Interproscan
GO:0035064	Molecular Function	methylated histone binding	Interproscan