Gene detail

Detailed information of ANN09457-RA in Leptoseris scabra

Genomic Location: Scaffold_6__1_contigs__length_62720928:53545387...53550701
NR annotation: CAH3026194.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P54253	Ataxin-1 OS=Homo sapiens OX=9606 GN=ATXN1 PE=1 SV=2
P0C7T6	Ataxin-1-like OS=Mus musculus OX=10090 GN=Atxn1l PE=1 SV=1
Q63540	Ataxin-1 OS=Rattus norvegicus OX=10116 GN=Atxn1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009780 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08517 all species →	AXH	Ataxin-1 and HBP1 module (AXH)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003652 all species →	Domain	Ataxin, AXH domain	Interproscan
IPR036096 all species →	Homologous_superfamily	Ataxin, AXH domain superfamily	Interproscan
IPR043404 all species →	Family	ATAXIN1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13392 all species →	ATAXIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23616	ATXN1_1L; ataxin 1/1L	-	Pathways of neurodegeneration - multiple diseases	ko05022	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.