Gene detail

Detailed information of ANN09747-RA in Leptoseris scabra

Genomic Location: Scaffold_6__1_contigs__length_62720928:59386235...59405076
NR annotation: XP_029196857.2, bromodomain-containing protein 7-like isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN09747-RA

ATGGGGAAGAAGCATAAGAGCAAGAAACATCACAAAAAAGGCACTAGCGCTGCTGAGGAAAAACCCGAGAGGTCAGAGAAGGTGGAGAAAGCTGAAAAACCGATCAAATTGGTGCTTAAAGTTGGAAGCAGTCAAGATAAGATCTCCGCTAAACCAGACCCTCCGAGCTCCACACGTAGGCCTTCAATGAATCTTGATAAAACCAAGTCCAAAGATCACTCATCGAAGAAGAAAAAGAAGAAAAGATCGGCATCCAGAGAAAGAAAGAAACCTAAGTTCGATACAGGATCTAGCGCCTGTCCCTCTCCATCATCAATCAGTAGCCATGAAAAATCCAAGAGGAAAAGGGACAGGCAAGAGCTGGAAGGAGAAGGCAGTGGCATTGTTGATGCAGAAAGACCAATTAAGAAAATCTATATAAAGCCTATAGAACCTCCAGCCAGAAACAGCCCAGAAAGTAGAAAAGTTGGTGGGTTTTTGAGAGAACCAGAGCTCTCACCTTTGCAACTTTGTTTGGAAAATGTACATCGTACTTTGCAGAGAAAGGATACTCAAGGATTCTTTGCTTATCCTGTTAATGACACTATAGCCCCAGGGTACTCCAACATAATTACTCACCCTATGGACTTCAGTTCCATGAAATACAAGATTGATTCCAATGATTACCACTCCTTGGAGAAGTTCAGGGATGATTTTTTTCTCATGTGTAATAATGCCATGGTTTACAATGCCCCAGAGACAATTTACTACAAAGCAGCAAAGAAACTTGTGCAATCAGGATCCAAGCTTTTGTCTCCTGAGAAAATGAGGAACATGTATCGCAGTATCGGGTATCCTATACCAGAATACGAAGGGAATGACTCTGAAGGGCGTGGCTCAGATGAACCAATAGATGTTGACACTGTTGATGCTGAGGAGAACCATTTGCCGCAGTCGACAAAGAGGACAAAACCAAAGTCTGAATCAAAGCATACTTCAGCCAGTCGAAAGATTCTCGCTCAAGTTCAGGAAGCTTCAAGAAGGATGGCTGGTGAGCTGGAGGGAAAATACCCCAACAGTAAGATTGGTTTTCTGCGGCGAGATAAGGATGGAACTACAACGTTAGCTGTTGTGAATCCCGTTGACTCTGAAGTACCTGAGTACCGTCCTGTGAACCTAGGAGCAACTCTTGGCAAAGTATCGTCTGGTTCGCATACAACTGCTGGCTTTAAAGAGGACAAAAGGAACAAGGCAACGCCAGTGTCCTATTTGATGTATGGACCTTACGGCTCGTTCGCTCCTTCGTATGACTCATCCAGGGCGACTATAACCAAAGAACAGTCAGACTTGCTGTACAGCACCTACGGAGATGATACTGGGATACATTATGCCAAGAGCCTCCAGGCCTTTGTCAAAGACGCTTCTTCAGTCTCACATGAAGCCGTGGATAGACTGCTGGACGCTCTGACAGAGGGCGCACATTCTAAATACCTGAAAGTGATGACTGAGAAGGAAAAAGTAGAGGAAGTAAAACAAGCGAAAGGGAATGCGGAGCAAAATATGGAAGTTGTAGCTTCTGAAAGCCAATCAAGTCAAGATGGGAGCAAGAAGCCCGCCGCATCTGTCACTGGTGATAATCCAAAGGTTTCTTCAACAACTACAGCAGTTGCACATTCTTCCAAAACAGGTGCAGCGAAAATAGATTTTCAGTCATTGTTGTCTCTGGCTGACGAAGGAATAGATGTTTCCTTTCTCCGACAAGATGAAACACCAAGTGGAAACTCATTGAGCTCGTTGCTGTCTCTTGATGTCCAAGACAAGTTGCATACCACTGGGAAACTTCTGGACGATCTTCAGGATGCGCAGACCGTACGCCTTAGCCACAGACCAGAGGGCCCCGGGGGACCCACCCCTGAGGCGGCCATTCGACCCTCCACACAAGAAAAGATTATCGCGGATCGTGTGACAGAAAATCTTAAAGATCTTACGTCACAGGTTTGTCCAGAAGACTTGACGTCGGTTGACAGTATACGCGCTGCGCTCGGAGTAGGACTGGTACCAAATTTGGCCCCAAGCCTTCGGCAAAAACCCGAAGACAAAACGGCTGATGAGAAGACTGGGTCTGCCCAGCCAGAATCTACTGACGAAAGTATGGAAACCACAGAGTCGATACTGCAGACTCCAGACGAGAAGACCTCTTGA

Transcript

ANN09747-RA

Protein

Uniprot

Uniprot term	Description
Q9NPI1	Bromodomain-containing protein 7 OS=Homo sapiens OX=9606 GN=BRD7 PE=1 SV=1
Q5R8B0	Bromodomain-containing protein 7 OS=Pongo abelii OX=9601 GN=BRD7 PE=2 SV=1
O88665	Bromodomain-containing protein 7 OS=Mus musculus OX=10090 GN=Brd7 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00439	Bromodomain	Bromodomain	Domain	Interproscan
PF12024	DUF3512	Domain of unknown function (DUF3512)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036427	Homologous_superfamily	Bromodomain-like superfamily	Interproscan
IPR001487	Domain	Bromodomain	Interproscan
IPR051831	Family	Bromodomain-containing	Interproscan
IPR021900	Family	Protein of unknown function DUF3512	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22881	BROMODOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0070577	Molecular Function	lysine-acetylated histone binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11723	BRD7; bromodomain-containing protein 7	-	Chromosome and associated proteins	ko03036	deepkoala