Gene detail

Detailed information of ANN09828-RA in Leptoseris scabra

Genomic Location: Scaffold_6__1_contigs__length_62720928:61045703...61067925
NR annotation: CAH3044817.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN09828-RA

ATGGACGAAGACGAAAAGAGGGCAGACAAGCTAGATGTTTTTTATCACCAAGTAAAGAAACAGATTCTTCAATACCAAAGTGGAAGCATTGGTCTGTTCCCCCTGCACACATCTGGTAAAAATGAGGAGAGTCATGTACGGGACAATGTTTACTGTGCAATGGTTGTCTGGGCCCTAGGGCTGGCTTACAGGCACAAGGATGACAGTAAAGGCAGAGCATATGAACTTCAACAGGCTGCAGTAAAATGTATGAGAGGAATTCTGTTCTGTTACATGAGGCAAGCTGACAAGGCAAGTGGGAGCTTGGGATGGCACGGTGTGGCTTCAGATTCGGAGTGGGCACATCTACAGATCGATGCTGTGTCCCTTTACCTTCTTACTCTTGTCCAGATGCCTGCATCAGGACTGCAGATTATTTACACCAATGACGAGGTCAACTTTGTACAAAATCTGGTGTACTACATTGAACGTGCTTACAGAACTCCTGATTACGGCATGTGGGAGAGAGGAAGTAAGGAAAATGTTGGACACAAGGAACTGAATGCAAGTTCTATTGGAATGGCCAAGGCTGCTCTTGAAGCAATAAATGGATTTAATGTTTATGGAATGCAGCACATCTTAAGTATCAACAGTAATCATGAGATTGATTCCGAACAGACACCCAACCTTGTTCCCAGGCTCTGGGACGTGAAGAAGAGAGACCCTGGGAATGAGATTGACAGACACCGACTTTGTGACCTTATTCCACATTATTACTATGTTCCCAAAATATACCTGGAGGCGGAGCGTAAGGAGCCGCACTCTCAGATTCGGTTGCCAAGTGACGAGGATGGCGACCTGTTTCTATGGGGACAGTCTCTATTGATCATCATGCAATTGCTAGAGAGTGATCTGTTAGATGTGAATGAGATTGACCCCATTGGTAGGCACTTGTCCCGCTCAGCTAAAAATCGCTATGGTTACAGCAGCCACAGATATTCTTCATTTAAGGTTGCTGACTCCGACTTGGTTGTTCAAGTGTCTTTAATCTCAGAAAGCAGAAATTTACAGACTACCTTAGCAACATTCGGTATTGAGACGCAGACTCCACAGCAGGTTGAGCCTATACAGATTTGGCCGCCTTCAGAGCTTGTCAAGGTATACAAGCGCCTTGGAGTCAATCGCAAACTCGGATGGTCAGGGCGTCCACCGAGGCCGATTGGAACTCTGGGAACCAGTAAGATCTATCGTATCATGGGTAGAACGGTGGTTACATATCCCAAGCTTCTTGATGAAATTGATTTTTATATGGCATTGGACATGTCGCTGCTTATCGATGAAATTAAGATTTTCCTTGTCCGCATTCATGTAGCTGATTGTAAGCTCGGTTTCGATTCATTGCCTGTTAATGCACACTGTAAACTTGTTCTTAGTAAGATAAGTATATTTGAAAGACCTACTCTGGCACCTAAAACAAATTTAGCGTTAACTCGCAATAACTGGAACATGAAGGGACGACCCACGCTGTGCCTCTTGCTGACAGAGAAAAACTTACGTGACCCAGACGAAACCGAGGGAGGACTGGACCAAGCACGTGTCAAAGAAAAGGAAGGTGTAGATTCCAATTCGCTGACACCTGGCTCGTCTGAAGGACACATGATAAGCCACAGTATTCGATTGAGCCGCTCCATGACAGTGACTCAACAGGATGATGAAAATACCTCTGACGAGGAGGACGCTAATCCCAGAGACCTGGTGACCAAGTCACGGGAGGCACTGCTCGCTGAACTTCTCACCAAGCCAAACGTCGATCGGCAAATGCTTCTCCTGCAGGAGTTGCTAAAGCGTGAGGGTGAATACTTCCAAACACAAGAAGGCACGGTCGGGGACATGATCCACTCGCTTTATCAGCAGGCTGCATATGACAGAAAATGGTCAGCGGTTCGCCGCGGAGCCGGGCTTCTAAAAAAGCTAGTGGACAGTTTGGCGCCCGGGATCACTACTATACTGGTCAGCGGTAAAGTGGTAACAATAGGTGTTTTTGGCCATGAAGAGAAAGTGATTTACGAGCCTCTGACGCCCGCAGCAATTCAGGTAATTAAAGACAATCTATCATTGAGAGCTAAGTATAAAGAGCGCGCAGCAGCGGAAGTGGCGACTCCAGTTCAGAGATGTAAAAGAACATTTCAGCCAAACGAATCCTCTTTTCATCGGCCTGAAAAAACACAAAACAGTTCGAAGCTTCACTGA

Transcript

ANN09828-RA

Protein

Uniprot

Uniprot term	Description
Q7TSH2	Phosphorylase b kinase regulatory subunit beta OS=Mus musculus OX=10090 GN=Phkb PE=1 SV=1
P12798	Phosphorylase b kinase regulatory subunit beta OS=Oryctolagus cuniculus OX=9986 GN=PHKB PE=1 SV=3
Q93100	Phosphorylase b kinase regulatory subunit beta OS=Homo sapiens OX=9606 GN=PHKB PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00723	Glyco_hydro_15	Glycosyl hydrolases family 15	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008734	Family	Phosphorylase kinase alpha/beta subunit	Interproscan
IPR008928	Homologous_superfamily	Six-hairpin glycosidase superfamily	Interproscan
IPR011613	Domain	GH15-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10749	PHOSPHORYLASE B KINASE REGULATORY SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005516	Molecular Function	calmodulin binding	Interproscan
GO:0005964	Cellular Component	phosphorylase kinase complex	Interproscan
GO:0005977	Biological Process	glycogen metabolic process	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan