Gene detail

Detailed information of ANN09896-RA in Leptoseris scabra

Genomic Location: Scaffold_6__1_contigs__length_62720928:62388299...62393469
NR annotation: CAH3141850.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6PGV1	V-type proton ATPase subunit d 1 OS=Danio rerio OX=7955 GN=atp6v0d1 PE=1 SV=1
P61420	V-type proton ATPase subunit d 1 OS=Bos taurus OX=9913 GN=ATP6V0D1 PE=1 SV=1
P61421	V-type proton ATPase subunit d 1 OS=Homo sapiens OX=9606 GN=ATP6V0D1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007187 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01992 all species →	vATP-synt_AC39	ATP synthase (C/AC39) subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016727 all species →	Family	ATPase, V0 complex, subunit d	Interproscan
IPR044911 all species →	Homologous_superfamily	V-type ATP synthase c/d subunit, domain 3 superfamily	Interproscan
IPR035067 all species →	Homologous_superfamily	V-type ATPase subunit C/d	Interproscan
IPR002843 all species →	Family	ATPase, V0 complex, c/d subunit	Interproscan
IPR036079 all species →	Homologous_superfamily	V-type ATP synthase subunit c/d subunit superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11028 all species →	VACUOLAR ATP SYNTHASE SUBUNIT AC39	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0033179 all species →	Cellular Component	proton-transporting V-type ATPase, V0 domain	Interproscan
GO:0046961 all species →	Molecular Function	proton-transporting ATPase activity, rotational mechanism	Interproscan
GO:1902600 all species →	Biological Process	proton transmembrane transport	Interproscan
GO:0005765 all species →	Cellular Component	lysosomal membrane	Interproscan
GO:0005769 all species →	Cellular Component	early endosome	Interproscan
GO:0007034 all species →	Biological Process	vacuolar transport	Interproscan
GO:0007035 all species →	Biological Process	vacuolar acidification	Interproscan
GO:0016471 all species →	Cellular Component	vacuolar proton-transporting V-type ATPase complex	Interproscan
GO:0033181 all species →	Cellular Component	plasma membrane proton-transporting V-type ATPase complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02146	ATPeV0D, ATP6D; V-type H+-transporting ATPase subunit d	-	Rheumatoid arthritis	ko05323	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.