Gene detail

Detailed information of ANN09923-RA in Leptoseris scabra

Genomic Location: Scaffold_8__1_contigs__length_51692913:387461...393031
NR annotation: CAH3032271.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN09923-RA

ATGGCTGAATCAAATCAAGAACCAATGTCTATCGAGGCATTTCGTGCAAAGAAAGCTGCCGCATCGACATACGACAAGCCGACGGCAAGCAGTTCGAGCAAAGTTTCTGCGAACTCATCAAATCCGTCTTCCAACTCGCCGCGTCAATCAAGGCCTGCTAGCGCGAGTAGAACAAATTCAGCGAAGCGATCTGTTTCTGCGGAAAATTTGGTGGGCAACCGTTTTGGCCCAGCACTCGATCAGAGGCAAAACAAAGTGAAGCTTCTTCGAGAAAAGCAAGCCGAAGAGAGGCGGCGAAAGAACGAGGAACGTAGGGCTGCTTTTGAGGAGAGAAAGAAGAAGAAAGAAGTGGAAGAGAAGGAAAGATGGGCAGATTTAAAGGAACAGGCAGCTAGGCATAGTGTTTCTAAGTCCAGTACTACGGCTTTAAAACCGGGCAGTGGTAGAAAACTCCCAACGGTACCAACCGAAGGTGCTGCTAAGCGACCAGGCAGTGCTGTGCAGGCACCAACACGTCCATCATCATTACCAAAGCCTTTAACGAGGCCTGTCAGTGCCAATCCTACTAAAAGCCCTTCTCGAAGTAGCACTGACAGTTTATCCGGAGGCTCTACACCAAAACAATCCCCTGCTACAACTCCTAGCGGCCTTCAACCAAAAACTTCACTGGCTAGTAGTAAGTCTGTGTCGGCAAGCAATTTAAATTCAGCTGCAAGTCGTCGATCCAGTGCTGGTTCTGCGCAGCAAAGACCATCGTCTGCTACTAAGACCCGAGCAAGGACATCATCAACGCATGCTTCAGCTCAGACACTGGAGAAACCTGGTTCAAGAAAAAGTACAAGCCATGAATCATTGTTACTGCCTGGGGGGAAATTAACCAAATCACACTCCACTAGTTCTATACACAGAGTTGGTCAGCATAAACCAGCAGCAGATAAAAGCCATAAGACTGAAATGAAGCCTAAAGCTGGTGTTACTGATGAAGCTACTGCCAAGCAGGCCTTGGCAGAAAGGAGAAAAAAAGCGAGAGAAGAGGCTGAGCGACAGGCTGCATTAGATAAGGAACGACAGGAGGCAGAAAGATTGAAAAAAGAAGAAGAAGAAAGAATACGGGCTGAGGAAGAGGCAAGGGAAGAAGCAAGAATGCGAGAGCTTGCTGAGCTTCTTCGTAAGCAAGAAGAGGAACGACTGCGGATAGCAGCCGAAGAGAAAGAGAAGAAAGATAAGGAGGAGGCTGAAAGAGCTGCAGCTGAGAAGAAACGTAAAGAAGAAGAGGAGCAGAGAGCAAGAGAGGAGGAAGAAAGAAAGGCTTATGAGGATGAGGAGAGGAGGAAACAAGAAGAAGCTGCAAGGCTGGAGAGAAAAAGGCGAGTGGAACAAATAATGAGCAGAACAAGACAAACTGCAAGTCCAATAACTACAGAGGAAAGCAACTCTTCTGCTACAGGAAATGAGGCAAGAGAACATGCTGATCCAGATGACACAAAACGTAAAGTGAATGAAATCCTTCAGAAGGTAAAAGGAGCCTCAGGAAACCCAAATACTTTCAGCCCGATGGAGGACAATGTTTCAGTGTCAGTTAGGGAGGCTGGTGAGGAGCAAGAGAATGATAGTGATTCCAAGACTGAAGAAGAAGTGACTGATATGTCAGAAAGTAATAGACCGCAAAGCTTTGATGCTCCTGATAACTTTTTAGACAGATCAACTGCTGATGCTGTTCTCATGAATGGACTTGATTCCTCTGCAGTGGACAGTTCTGATGGTGAATCATTAACAGTGCATACGTTGTCATCATCACCACCTTTAATAGGTTCACAGCAAGAATCAAATTACACAATGATGTCAAATGGATCCACAAATCATGAACAGCAGATGGAGAATGTCTTGTTTCAGTATAAGGAAGAGTCATCAGTGACAATTGACAAAGAGAATTATGGTGTTAATGGAACAGGTCAAGTTTTGGAAACTGAAAAATTATCAAATGTGGAAGCCACTGTGAGACATCTTCCTGAAACAAAGCAAGACTTTGCTGAAGATTATTCGCAAAGAGCCAACAACGACTTAGTTGGTGACCAGGATGAAGAGACACTGTGGTTAAAAATAGAAGCTACCATGAAAGCAAGAGAAGCCTATGCTGTTGAAGCTTTAGAGAACCTGGGTGTTGTCGCTGAAGGTGATGATGATGAGGACAGTGAAGAAGGAGAGCTGTGGAAGGTTGTAGAGGGGAAGGCACAGCTGGCTGAGATAGTATAA

Transcript

ANN09923-RA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008479 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05672 all species →	MAP7	MAP7 (E-MAP-115) family	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051483 all species →	Family	Microtubule-associated protein 7 domain-containing protein	Interproscan
IPR008604 all species →	Family	Microtubule-associated protein 7 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15073 all species →	MICROTUBULE-ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000226 all species →	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0015630 all species →	Cellular Component	microtubule cytoskeleton	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN09923-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.