Detailed information of ANN09964-RA in Nanomia septata

Genomic Location: chr4:163424280...163439009
NR annotation: ABD95939.1, rhamnospondin 1 [Hydractinia symbiolongicarpus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
B3EWZ3Coadhesin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00088TrefoilTrefoil (P-type) domainDomainInterproscan
PF02140Gal_LectinGalactose binding lectin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR017994FamilyP-type trefoil, chordataInterproscan
IPR017957Conserved_siteP-type trefoil, conserved siteInterproscan
IPR000519DomainP-type trefoil domainInterproscan
IPR043159Homologous_superfamilyD-galactoside/L-rhamnose binding SUEL lectin domain superfamilyInterproscan
IPR044913Homologous_superfamilyP-type trefoil domain superfamilyInterproscan
IPR000922DomainD-galactoside/L-rhamnose binding SUEL lectin domainInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906PROPERDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0030246Molecular Functioncarbohydrate bindingInterproscan

TOP