Gene detail

Detailed information of ANN09975-RA in Nanomia septata

Genomic Location: chr4:163873198...163880113
NR annotation: XP_047128246.1, MAM and LDL-receptor class A domain-containing protein 1 isoform X2 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q5VYJ5	MAM and LDL-receptor class A domain-containing protein 1 OS=Homo sapiens OX=9606 GN=MALRD1 PE=1 SV=4
Q63191	Apical endosomal glycoprotein OS=Rattus norvegicus OX=10116 GN=Mamdc4 PE=1 SV=1
A2AJA7	Apical endosomal glycoprotein OS=Mus musculus OX=10090 GN=Mamdc4 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00629	MAM	MAM domain, meprin/A5/mu	Domain	Interproscan
PF00057	Ldl_recept_a	Low-density lipoprotein receptor domain class A	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023415	Conserved_site	Low-density lipoprotein (LDL) receptor class A, conserved site	Interproscan
IPR000998	Domain	MAM domain	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR036055	Homologous_superfamily	LDL receptor-like superfamily	Interproscan
IPR002172	Repeat	Low-density lipoprotein (LDL) receptor class A repeat	Interproscan
IPR051560	Family	MAM domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23282	APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan