Gene detail

Detailed information of ANN10015-RA in Leptoseris scabra

Genomic Location: Scaffold_8__1_contigs__length_51692913:2259265...2276458
NR annotation: CAH3176183.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN10015-RA

ATGAATCTTGATGCAAACTGTTCCACGAAAGTACGGCTGGACAAGTATTGTCTAAGGAAAGTGTTCAACTATAACATTCAAAACCAGGAAAAGACAGTTTACAGATTTGTTCTGAAAATGGACTTGATGCAATTACTCGATTTTAACGCTGAACTTGGAAACCTGGTTATAGTTGAGCCTCTGAACGCCATTAATTTGTTTCAAGAGGTGTGTTATATCACAATTCATACTCTGTCGTGGATTCCGCACTTGCTGTTCCCATCACAAGTTCTGACCATTGTCAGATTTTCATCTGTTTCACCGCATAAAGAGTGTGTGAGTAGTAAGAATCTTGTTGGGCATGGTCAGCCAAATCTGGTAAAACTTGTTGGAATTGTTAGTGGAATGACAGCTGTCAGTAAGTACACCCAGAGTGCTAGATTCTATTGTCCTCAACCCAGCTGCTTTGGCTCATGTAAACACTGTTACATCAGAGTACATTTAGCTGGCAAAACGGAGGATGTTACTGTAAGAAGTGACTTTGTTTGTCGATACTGTGGGTCATCTCTCGTTGAAGATGTTACTTGCCGTACTTTGGCAGATAAGTGTATCGTGCAGGTTATATCTCCGCTAGTAGTGGACAAAAAGCTGTGGATTAACAATGATGGTAAATTCTACCAAGCGGTATCAATTTATGTCCGAGATGAGCTTATTAAAGAAGTTCAGCTTGGCAGTCACTACTCATTTGTTGTTTTACCATCTTGTGAAGTTCATGAATCGTCTGTGCACTTTCAATGCACTCCAATCTTTGAGGCAAATAACATAGAGAAGATATGCCCTAGTCCTCTTCTACTACCGTGCAGACTTCCAGAGAAAATAGAGATGTTATATAAAGATAGGCTGGATTCACCCTGGAGTTTTGCTGCCAGTCTAGCTTATTGCTTTGGAGGTTCTGTGACACCCCCCGGCACATTCTTTCAGTTGAAACTGTTTATGCTATTGTGCCTCCTGCTGCTCCACTGCTCTGAATCTCCTGAGGATCTTAAGCAAGTTCATTCCAAGAATCTACACTTACTTGTTATTTCTGAAGACCTTCTCAGGGTGCAAAGGCTTTTGCTGTATGGAGCTTCATTTGCTAAGAGGTTGATTGTGTATTCTCCTATCAGTGAATTGTTTGCATCATGTTCTCGAGATCCCTTTGGTTCTGGCACTTGTGTGGTTAATGCTGGATGCATTCCCTTGGCAAAAGGTGGTATATGTGTCATTCCTAATGTTGCTGTATTGAAAAAGGATCAAAAGGACAAGCTTCAAAATGCCTTGGAGAATGCGTCGATAACAGTCAAGGTTCCAGAAAAGTACTGGTCATACCAAGGGCAGCAGTTGTCTTTACCGCTGACCTGTAGTCTGTGGGCATGTTCTGAACCCTCTCAGCAAGGAATGCTTGATCCTATGTTAAATCTGGCTCACACCGTAAAGGACTGTCCAGCAATATCAAGGGCATTTATGGACCAGTTTTCGGTTGTTTTTAACTTGAGTGGTTCAACGGATCAAGCAGACAATCATGACAATTCTGTGAGTGAGGAGGTGTTAGGAATGGCGATGGAAAACACAGAAAACGAAGCATCGTTTTACATAAGTGACGAAGAATTTAGCCAGTTTCTACACTACGCTGCAAATCAGAGTGTTAAGCTGACTGTGGCTGCCCAAGACCTTATTCAAAGTTATTACCTAGCAAGTAGACGGACAAGAAACTCTTATGCAACAAGTGGCTTGGACTTTCCAGTGTCTGCACTGCAAATTCTGACCAGTTTGGCTATTGCTCATGCGAAGTTAGCTCTTCATTCAGAGGAAATAACCATTCGCAAAGCCGTTGCGAGCGATTTTGAAGCCGTTGTGGAAATGTCAGAAGGAATATACAACGGACACGACTACTTTCCTTGTGTTTTCCATCAGTGGCTCGATAAACCAAACCGCACGATTTTTGTCGCTCAGTATAGTGACAAACTCATAGGGCTTAGGGCGATTCACATCGTAGATGAAGGGAGAACATTTATTAGTCAAGGCTTGCGGATTCATCCTAGATTCCGAGGGTTCGGACTGAGTTCTCGACTGATTGAGGCTATTCACGGCTACATACGACTAGAATATCCAAACGTTTGTCGAGAACGTTTCACAACTAAGTCTGACAACATCGAAAGACTTGCCATCCAGAAGAAATACGGTGACACCGGCTTGTTTGAGCGTGATATTCTGGCCTATTACGTCTTCAAGGACACTGTGAAGAAACAGACATTAGATGAAGTAGCCGAGAATTTTGACGTACAGGTGAAACCCTGCACAAGAAACTTCCTCTACAATTCCATTCTCGATGACTCGGTGGCAAACATGTTTCCTGGTCGTACCATCATTATTGACTGGGAGCCCTTTGAAGCTCTCCGATCCAACATCGATTGCATTTTTGAGGAGGGCGACTGTGTTTTCTCGGACCGAGATGCAACCGACTGTTCTGGGGGCCAGTTACCAAAGTCATTCGCCCATGGTCGGCGTTCCCCCAGAGTGAAGCACATGCACTGGGTGGCGTCCATTTATACAGAAGACCCAGTGATGTTCCAAGTTCATGTGGTCCAACAATTGAAGAGCGCCTTTGAGGAGATACAAGGTGACTTCATCTTCTCTACTTTTCACAAGCAAAGTCACACCAAGTGGGGGAAGAAGCTGCTAGAAGAAAACATCGGATTGAAGTCGGTAGAATTCTTCCGTGATTTTGGATTGATGATGTTTGAACGGAAATTTGTAAAATGA

Transcript

ANN10015-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4G0Z9	Minichromosome maintenance domain-containing protein 2 OS=Homo sapiens OX=9606 GN=MCMDC2 PE=1 SV=3
E9Q956	Minichromosome maintenance domain-containing protein 2 OS=Mus musculus OX=10090 GN=Mcmdc2 PE=2 SV=1
Q5XI14	Minichromosome maintenance domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Mcmdc2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004345 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00493 all species →	MCM	MCM P-loop domain	Domain	Interproscan
PF00583 all species →	Acetyltransf_1	Acetyltransferase (GNAT) family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001208 all species →	Domain	MCM domain	Interproscan
IPR016181 all species →	Homologous_superfamily	Acyl-CoA N-acyltransferase	Interproscan
IPR000182 all species →	Domain	GNAT domain	Interproscan
IPR052668 all species →	Family	Histidine N-acetyltransferase	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47403 all species →	LOC100145250 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0032508 all species →	Biological Process	DNA duplex unwinding	Interproscan
GO:0016747 all species →	Molecular Function	acyltransferase activity, transferring groups other than amino-acyl groups	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN10015-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.