Detailed information of ANN10046-RA in Leptoseris scabra

Genomic Location: Scaffold_8__1_contigs__length_51692913:2934526...2943906
NR annotation: CAH3168466.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8WUA2Peptidyl-prolyl cis-trans isomerase-like 4 OS=Homo sapiens OX=9606 GN=PPIL4 PE=1 SV=1
Q9CXG3Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus musculus OX=10090 GN=Ppil4 PE=1 SV=2
P0C1I6Peptidyl-prolyl cis-trans isomerase-like 4 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=cyp13 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004998 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076
all species →		RRM_1RNA recognition motifDomainInterproscan
PF00160
all species →		Pro_isomeraseCyclophilin type peptidyl-prolyl cis-trans isomerase/CLDDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035542
all species →		FamilyCyclophilin-RNA interacting proteinInterproscan
IPR000504
all species →		DomainRNA recognition motif domainInterproscan
IPR002130
all species →		DomainCyclophilin-type peptidyl-prolyl cis-trans isomerase domainInterproscan
IPR035538
all species →		DomainPPIL4-like, cyclophilin domainInterproscan
IPR029000
all species →		Homologous_superfamilyCyclophilin-like domain superfamilyInterproscan
IPR012677
all species →		Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979
all species →		Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45843
all species →		PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0000413
all species →		Biological Processprotein peptidyl-prolyl isomerizationInterproscan
GO:0003755
all species →		Molecular Functionpeptidyl-prolyl cis-trans isomerase activityInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K12735PPIL4; peptidyl-prolyl cis-trans isomerase-like 4EC:5.2.1.8
Chaperones and folding catalystsko03110deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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