Genomic Location: chr4:171121133...171165866
NR annotation: XP_012553446.2, bromodomain and WD repeat-containing protein 3 isoform X2 [Hydra vulgaris]
| CDS | |||||
| ANN10050-RA | |||||
| Transcript |
| ANN10050-RA |
| Protein |
| ANN10050-RA |
| Uniprot term | Description | ||||
|---|---|---|---|---|---|
| Q8WWQ0 | PH-interacting protein OS=Homo sapiens OX=9606 GN=PHIP PE=1 SV=2 | ||||
| Q921C3 | Bromodomain and WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Brwd1 PE=1 SV=2 | ||||
| Q8VDD9 | PH-interacting protein OS=Mus musculus OX=10090 GN=Phip PE=1 SV=2 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|CDC20 |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| PF00439 | Bromodomain | Bromodomain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR052060 | Family | Bromodomain and WD repeat-containing | Interproscan |
| IPR036427 | Homologous_superfamily | Bromodomain-like superfamily | Interproscan |
| IPR019775 | Conserved_site | WD40 repeat, conserved site | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR001487 | Domain | Bromodomain | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR16266 | WD REPEAT DOMAIN 9 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0007010 | Biological Process | cytoskeleton organization | Interproscan |
| GO:0008360 | Biological Process | regulation of cell shape | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K11798 | BRWD1_3; bromodomain and WD repeat domain containing protein 1/3 | - | Ubiquitin system | ko04121 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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