Detailed information of ANN10081-RA in Nanomia septata

Genomic Location: chr4:173283084...173296195
NR annotation: MCH2406071.1, reverse transcriptase family protein [Nitrosopumilus sp.]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96I99Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Homo sapiens OX=9606 GN=SUCLG2 PE=1 SV=2
Q9YI36Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial (Fragment) OS=Columba livia OX=8932 GN=SUCLG2 PE=1 SV=1
Q9Z2I8Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Mus musculus OX=10090 GN=Suclg2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00549Ligase_CoACoA-ligaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF08442ATP-grasp_2ATP-grasp domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005811DomainATP-citrate synthase/succinyl-CoA ligase, C-terminal domainInterproscan
IPR016102Homologous_superfamilySuccinyl-CoA synthetase-likeInterproscan
IPR017866Conserved_siteSuccinyl-CoA synthetase, beta subunit, conserved siteInterproscan
IPR005809FamilySuccinate--CoA ligase-like, beta subunitInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR013815Homologous_superfamilyATP-grasp fold, subdomain 1Interproscan
IPR013650DomainATP-grasp fold, succinyl-CoA synthetase-typeInterproscan
IPR011761DomainATP-grasp foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11815SUCCINYL-COA SYNTHETASE BETA CHAINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004776Molecular Functionsuccinate-CoA ligase (GDP-forming) activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006099Biological Processtricarboxylic acid cycleInterproscan
GO:0006104Biological Processsuccinyl-CoA metabolic processInterproscan
GO:0042709Cellular Componentsuccinate-CoA ligase complexInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

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