Gene detail

Detailed information of ANN10193-RA in Leptoseris scabra

Genomic Location: Scaffold_8__1_contigs__length_51692913:5992811...5999998
NR annotation: XP_020601194.1, uncharacterized protein LOC110040319 [Orbicella faveolata]
Species abbreviation LSCAB · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN10193-RA

ATGGTTTCAAAAAATGTGTCATTTTTTGTGCTTAGGACGTTCCATGTTCACGAGACACAAAGAAGACGTCGCCTTAGCAAAGGGGCTATCACACGACGACGAAGGACATTCTCTTATCGCATTCTCACTACCTACGAGAAAGCGTTCGAGAAATTTGGATTTTTTCTAGCTCGCAGACCACAGACTGTATTGTTAGTGTTGCTTATCGCTGCTGTAGTGTGCTGCCTAGGGCTCATTCGCGTAAGTTTTGAACTGCCATCAAGTGAGCATTTCACCGTCTCTAACAGCCAGTCCAGACGAGATCTCGACCATGCAGCCCAATTCTTCCCAATTTTTGCAGCACGTCAGGAACAGATTGTTATGATCCCTGAAGATGGTCAAAACATTCTAAGTGATGATTGTATAAGAGACGCGTTCTTTATACATCAGGTTGTTTTGAATATAAGTGGTTACGAGGACTTATGTCTTAGACAACTGCTCCCTAAAAGTACAGCCGAAAAAAGCGCTAATGATAACTGTATCATTAGCAGTCCTCTGGAGCTAGGTGGTGCTCAGTGTGAAAATTTAAGCAACCTACCTTCTATTCTTGCGCGAGAGTGGACCAATCCCGTGAAGCTGCTTTCTACTGGTCAATCATTCCATTTTTCGTTCAAAATGATGCTCAGTAATTTTGAAGTAAATCACAGCACGAATCCAATGACTGCACGGGCTGATGCTCTTCGAGTTATTTATTTCATAAAAAAGTCAACTAATAAAGAGCAAGCCCAGACAGTTCGAAACTTCGAAACGTTATTTGAGAATCGTGTCTCTTCAGCAAAAGATCGGCTGAAATGTGCAACCCTCTACTTCAGGACAGAAAAAGCAAGAACTGATGTTTTACAAAACGCCCTGCGACCAGAGATACGCCCACTTTATTTATCAGCTTTAATAACGCTTCTTCTGGTGGCAACTGTCATCTACTTTTCTTCCAGAAATCTGAACTGCCTTACAGCAGTTTTATTGATATTCTTATCGATATTGGCACCTCTAGTGTGCGCAGCAGGTATTGTTTCAATGGCAAACATTTCCCTTTCATCAACTACCTTGTTCGTTCCCTTTCTGCTGGTAGGAAAAGCAATTTCAGACATCTTTTTCGTCTTGAGAGAATGGAAACGGCTAGAGAACGTTCTATCACTAGAACACCGAACCAGCAGCTGTGTTGCGAGAGCGGGAACCCTGCAAGCAGTTTCAGCGTTGACTGGAGCAATTCTCTTTGGAATTGCAATCAAGTCTTCGTTTGAAGTGATTTCAACGTTCTTTGTGGTAGCACTTATAGCTTATGTACTTGTTTCCGCGGCATCTTTTGTAATAACTGTCACTTTTATGTTGTCGCTAAAGAGACAGTTAAAGTCATTGAACACTTTTTGTGCGAGTTCTAATGATAGAAGGTTACTATATACCAACATTGGAAGATTGAACAAAGAAACCATGGAGATACTAAATAATAAACTACGGCGCTTTTTGGATGACCTTTCTTGGGCGCTTTCCTCAACTGGTGCAAAAGCAATTTCAACCGTGATCTTCTTCTCCATTGCCACATTGTGTGTGATTTTGGCTGTACAGCCTGGCGAAAGAACCAGCGTTACTACAAGCCTTCATCGACAAAATGACAATTTTAACCAGTTCCACAAAAGACAACAAATGTTCTTCGGAACTGAAACTAGTGTGAGCATTGTTTTTGCACACAATGTTGATTACTCCGACAAAAATGTTCAGAATCAAATAATAGACATTTGCAGGACGGTAGGTGGAGCTTCTTACAGTCAGGAAGAATCTGTTTGTTGGATTAGGTTCTTATTACAATGGGCAAATGAGAGGAACTTGAGCTGCTCAGATTCAGAATTTTACACCTGTCTGAACATGTTTCTTAATCAATCAAGCGACATCGATTTCCGGCAAGACTTACGTTTCATTGAAAATAATCCCCACTTTCGAATCCTTGCATCTCGTATTCACGTCCAAATGGCACAACACAGCAACTTTGGAAAAAACAGAGCGTCGCTTGACAAACTGAGGCACGATTTGTTAAAGCAATCTCTTCTCCAGGCTGCACCAGTATCGCACGTATTTTTTGAGCTTGACGACCTCTTTTCCTTGGAAAGAGAAGTTGTCTTCGCTCTTATAATTTCTGCTGTTGTCATCTTTGTATTGTCTCTGTTATCAACGTCATTTATCAGGATCAGTACTTACATAACAGTAACATTTATCTTCCTGTTATTAGAGACAGCAGGAATTATGAAGGTGAGGGAAATTCACCTGAATCATATCACCTTCATTTCCATGTTTTTGGCAATTGTCCTGGCCCTCAATCTCAATCTTCAAGTGGCTCATTGTTTCGTATTTTCCGAAAAGCAGAAAGTAAGACAACGTATGACATCAGCCTTACGTACAATTGGGTGGCCTGTAGTAATTGCAGCACTGCTGGAGATTTGTGGATCTATTTTACTGGGGTTTATCTATCCAACTCTGCAAGACATTTTCTTTCGACTCATTCCTTCAGTACTTGCGCTTGGTGTGATCCATGCGCTAGGTATATCCCCGCCAATAATCACAATATTGTTTGAATTCATAAGCAGTTTTGATTCACCGATTGAAGAGGGCATACCAATGGATCTAAGCGAGAGTGTAAAATCTCTTAAATTATTGGAGGTGGACACATCAGCACTCAAGCCTAAACGGCCTGGTATATCAATCGTTGGCATCGGATGCAGGTTCCCTCAAGCTAACAGTAAGGACTTGTTTTGGGAACTTCTCGAGCAAGGAAAGAGCTCAAATGGTCCTTTCCCTCAAAATAGAAAAGAACAACATGAGACGTTTTTTCAACTTTATCATCCAAGGCGCTTTGTAAGTGGGCGTCTGTGTGCTGTCAATGGTTCCTACTTGGAAGAAATCCAAAATTTTGACAACCGCTTCTTTGGTATATCCAATCAGGAGGCACGAGGGATGGACCCTCAACAAAGGATTCTCCTAGAAGTGGTGTACGAGGCAATTGAAGACGCTGGAATGAGACTTGAAGACCTTCAGAAGTGCAGGACAGGGGTCTTTGTCGGCGTAATGAATCTAGAGTACGGAGCGCTAGTAACAGATACATCAAATTATAATAACATCGACCAGTTTTCATCTACTGGAATGACCGCATCTATTCTCGCCAATAGAGTGTCCTTCTGTCTCAACTTTACAGGTCCAAGTATCGCAGTTGATACGGCATGCTCTTCGTCCTTGACTGCACTTAAACTTGCATGCGACAATGTTCACAACGGGGATTGCGATATAGCCATTGTCTGCGCGCCAAATATCGTACTGAACCATGCCATGCAGATGGTATCCAGCATGGCTGGCCTTCTGGCGCCTGACGGCCGCTGTAAAAGCTTCGATGCTTCCGGGGACGGCTATGGAAGGGGAGAAGGTTTTGCAGCAGTTATTCTGAAACTGTCACATGCTGTTATAAGTGACAAAGATGACGCATATTGTGAGATAATTGGCTGTGGAATGAATAACGATGGTCAAGATGCCATACCAATGACGGCTCCCAGTTCGAGGTTGCAAGCTGGACTATCAAGGATGGTTCTTGAACAGTCGGGTGTGAACGCGGAAGACGTGAGTTACTTTGAGGCACATGGCACTGGAACCGCCATTGGAGACGTGATAGAGGTTACTTCAATTGCAGATACGTATACCAGAGGGACTACAAACCCCACACGAAAGCTACGAATTGGATCTGTGAAGCCAAACCTCAACCACACGGAGTCTACCTCGGGACTGGCTGGGCTTATAAAGGTCGCTCTGATGATTAACAAGAAAAGACTGGTCCCAACTGTTAATGTGAAAATAGTGAATCCGAAACTGAGGTTAGATAATAAAGGTCTCATTGTGCAACAGACCAGCGAGCCTTGGAACACAGAAAACGGGAAACATCGTATAGCTGCTGTGAACTCATTTGGCTACGGTGGTTCAAATGTGCACGTCATCCTTCGAGAAGTTATAAGAAAGAACAATTTGGAGGAGGAGAAAGTTAAGCGTCTTAATAACATCCTCACCATCTCCGCACGTTCGCCAGAAGCCCTGAAGAGGATGGCAAGACTGTACTCCAACTGGCTTAACGATAGGGTCACAGATTCGGATTCATCGTTTTTAGAAAATCTATGCTACTCACTGAACGAGCGTCGCAGTCGATTCCCACACCGCTTGGCACTTTCTTTCGAATCAATTTCAGAGGCATCCAAGGCTCTTTTAGACTACGCAGATGGATCCGTAGGGTGGGAGAAGGTCGCTTGTTACGATGAAGTGAAATCTTGTAATACAAAACTTGTGTTTATGTTTGGGGGACAGGGTTCTCAATGGTACGCCATGGGGAGACAGCTAGTTACGTCAGAGCCTGTTTTCAAAGACGCCATTTTGGCAGTCAGCAATTTAGTTCAAGGCTTAGGGAAACCTTGGTCAATTGTAGATGAGCTCATGGCATCGCAAGATGAAACGAGAATCACAGAAAATTCCATCTCGCAACCGGCCACGTTTGCCATACAATATGCGACTGCACAGTTGTTGATGTCCTGGAGAATCTACCCATCTGCTGTTCTTGGACACAGTTTGGGTGAGTTTGCAGCTGCATGTACTGCTGGAATTATCACCCTCAAGGAAGCTATCCAGCTGGTATTGACTCGCTCCACGCTTCAGGATCAATGTCCCAATAACGGCGGTATGGCAGCTCTGGGTATGTCAGAAGAAAAGGCTCGAAATTTGCTGACCCAGTTGAAGTTAAGCCCAACACTTTCCATTGCCGCAGTAAATGATGCAAACAGTGTCACAGTATCTGGTGATTCTGAGTCAATTGAAGCCCTTGGGAAACATTTAGCCATTCACTCAAAACACACTTTCTGGCGCGTTCTTAGCACGAAACGCGCATTTCACAGTGCACACATGGAGCTTATTAAGAAGCCTTTTCAAGCAGAAGTAAGGCGAATCAAGTTGAAACCTCAGCTATCAAAGATTCCAATGTACTCTACCGTCGAAGGTGAAATTATCTCAGGTGAACAATTTAACCGCAATTATTGGTGGCGTAACATTCGCTGTCCAGTCCAATTCCAACCAGCAATAAAGAACGTGCTGAAAGACGGCCACAAGCACATCATTGAGATCAGCACCCAGCCTATTTTAGCACACTATGTCAAACAGATTGCAATACAAGAAAACCTTCGTGACCACGCAATACCAATTGTCCTGGCAACTCTTCCGCGTAAAAGAGTACCTGTAGATCAGCAGCACAAGTTCTTTCTCCTGAATACTGTATGTAGATTATACACAATGGGATTTCCCGTAGATTGGTCATTTGTTCAGAGAAGTCCGTCAGCCAAGTTCATCCGCTCGCTAAGCTATCCATGGCTGGAAAATAGCTTTTGGTACAGAGAGAATTCGCCCAAAAGCACAATTTCACCTGTTGGTACCGAGAAAAGCTCAGAGAACAGGACACACCCATTTTTAGGAAAGGTGAAAATGACCGACCTGTATTCAGGCCTTCACTGCTGGGAAACTGAAATTGACCTCCATCGCTTTCCAAATCTGAGGGATCATGCTCTTATTCAAGGAGGAGCCGTGATGCCAGGAGCGACCTATTTGGAAATGGCATTTGCGATGGTGAAGGACCAGTTCGTGGACGTGGCTGGGTTGGAACTAAGTGATGTGAAGATCTCGAGCCTTCTGACACTGCCTGAAACACAGGTTCGATATTTAAGACTGCGTCTTCAAAAGACTGAGAGTATTGCTGAGGCGAAGTTCCACATTACAAGCGTTCAGGACGGACATTCCGAGATTAATCTGAGCAGCGGGAGAATCTCTGTGGATCTTTTGTCTAAACATGAGAACTTTGAGAGTGAAGTGTCCAGTGATGTTGGCAGAGCAGTACAAGAGCTGATAACAGACATGAGGAAAATGCCGATGGGTCGGTTCAGAGAAGTGACAGAGAAGTACGGCTTCAAGTATGGACCTACCTTCTCCATCATCAAGGATATCTGGGAGTGCGACAACGAGGGTCTTTGCCTGGTTGAAGTAAATACGGCAGCAAAA

Transcript

ANN10193-RA

Protein

ANN10193-RA

MVSKNVSFFVLRTFHVHETQRRRRLSKGAITRRRRTFSYRILTTYEKAFEKFGFFLARRPQTVLLVLLIAAVVCCLGLIRVSFELPSSEHFTVSNSQSRRDLDHAAQFFPIFAARQEQIVMIPEDGQNILSDDCIRDAFFIHQVVLNISGYEDLCLRQLLPKSTAEKSANDNCIISSPLELGGAQCENLSNLPSILAREWTNPVKLLSTGQSFHFSFKMMLSNFEVNHSTNPMTARADALRVIYFIKKSTNKEQAQTVRNFETLFENRVSSAKDRLKCATLYFRTEKARTDVLQNALRPEIRPLYLSALITLLLVATVIYFSSRNLNCLTAVLLIFLSILAPLVCAAGIVSMANISLSSTTLFVPFLLVGKAISDIFFVLREWKRLENVLSLEHRTSSCVARAGTLQAVSALTGAILFGIAIKSSFEVISTFFVVALIAYVLVSAASFVITVTFMLSLKRQLKSLNTFCASSNDRRLLYTNIGRLNKETMEILNNKLRRFLDDLSWALSSTGAKAISTVIFFSIATLCVILAVQPGERTSVTTSLHRQNDNFNQFHKRQQMFFGTETSVSIVFAHNVDYSDKNVQNQIIDICRTVGGASYSQEESVCWIRFLLQWANERNLSCSDSEFYTCLNMFLNQSSDIDFRQDLRFIENNPHFRILASRIHVQMAQHSNFGKNRASLDKLRHDLLKQSLLQAAPVSHVFFELDDLFSLEREVVFALIISAVVIFVLSLLSTSFIRISTYITVTFIFLLLETAGIMKVREIHLNHITFISMFLAIVLALNLNLQVAHCFVFSEKQKVRQRMTSALRTIGWPVVIAALLEICGSILLGFIYPTLQDIFFRLIPSVLALGVIHALGISPPIITILFEFISSFDSPIEEGIPMDLSESVKSLKLLEVDTSALKPKRPGISIVGIGCRFPQANSKDLFWELLEQGKSSNGPFPQNRKEQHETFFQLYHPRRFVSGRLCAVNGSYLEEIQNFDNRFFGISNQEARGMDPQQRILLEVVYEAIEDAGMRLEDLQKCRTGVFVGVMNLEYGALVTDTSNYNNIDQFSSTGMTASILANRVSFCLNFTGPSIAVDTACSSSLTALKLACDNVHNGDCDIAIVCAPNIVLNHAMQMVSSMAGLLAPDGRCKSFDASGDGYGRGEGFAAVILKLSHAVISDKDDAYCEIIGCGMNNDGQDAIPMTAPSSRLQAGLSRMVLEQSGVNAEDVSYFEAHGTGTAIGDVIEVTSIADTYTRGTTNPTRKLRIGSVKPNLNHTESTSGLAGLIKVALMINKKRLVPTVNVKIVNPKLRLDNKGLIVQQTSEPWNTENGKHRIAAVNSFGYGGSNVHVILREVIRKNNLEEEKVKRLNNILTISARSPEALKRMARLYSNWLNDRVTDSDSSFLENLCYSLNERRSRFPHRLALSFESISEASKALLDYADGSVGWEKVACYDEVKSCNTKLVFMFGGQGSQWYAMGRQLVTSEPVFKDAILAVSNLVQGLGKPWSIVDELMASQDETRITENSISQPATFAIQYATAQLLMSWRIYPSAVLGHSLGEFAAACTAGIITLKEAIQLVLTRSTLQDQCPNNGGMAALGMSEEKARNLLTQLKLSPTLSIAAVNDANSVTVSGDSESIEALGKHLAIHSKHTFWRVLSTKRAFHSAHMELIKKPFQAEVRRIKLKPQLSKIPMYSTVEGEIISGEQFNRNYWWRNIRCPVQFQPAIKNVLKDGHKHIIEISTQPILAHYVKQIAIQENLRDHAIPIVLATLPRKRVPVDQQHKFFLLNTVCRLYTMGFPVDWSFVQRSPSAKFIRSLSYPWLENSFWYRENSPKSTISPVGTEKSSENRTHPFLGKVKMTDLYSGLHCWETEIDLHRFPNLRDHALIQGGAVMPGATYLEMAFAMVKDQFVDVAGLELSDVKISSLLTLPETQVRYLRLRLQKTESIAEAKFHITSVQDGHSEINLSSGRISVDLLSKHENFESEVSSDVGRAVQELITDMRKMPMGRFREVTEKYGFKYGPTFSIIKDIWECDNEGLCLVEVNTAAK

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8J0F5	Compactin diketide synthase mlcB OS=Penicillium citrinum OX=5077 GN=mlcB PE=1 SV=1
A0A1W5T1T1	Highly reducing polyketide synthase poxF OS=Penicillium oxalicum OX=69781 GN=poxF PE=2 SV=1
N4WHE3	Reducing polyketide synthase PKS1 OS=Cochliobolus heterostrophus (strain C4 / ATCC 48331 / race T) OX=665024 GN=PKS1 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000656 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00109 all species →	ketoacyl-synt	Beta-ketoacyl synthase, N-terminal domain	Domain	Interproscan
PF02460 all species →	Patched	Patched family	Family	Interproscan
PF02801 all species →	Ketoacyl-synt_C	Beta-ketoacyl synthase, C-terminal domain	Domain	Interproscan
PF16197 all species →	KAsynt_C_assoc	Ketoacyl-synthetase C-terminal extension	Family	Interproscan
PF21089 all species →	PKS_DH_N	Polyketide synthase dehydratase domain	Domain	Interproscan
PF00698 all species →	Acyl_transf_1	Acyl transferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018201 all species →	Active_site	Beta-ketoacyl synthase, active site	Interproscan
IPR014030 all species →	Domain	Beta-ketoacyl synthase, N-terminal	Interproscan
IPR016036 all species →	Homologous_superfamily	Malonyl-CoA ACP transacylase, ACP-binding	Interproscan
IPR003392 all species →	Family	Protein patched/dispatched	Interproscan
IPR001227 all species →	Homologous_superfamily	Acyl transferase domain superfamily	Interproscan
IPR016039 all species →	Homologous_superfamily	Thiolase-like	Interproscan
IPR014031 all species →	Domain	Beta-ketoacyl synthase, C-terminal	Interproscan
IPR032821 all species →	Domain	Polyketide synthase, C-terminal extension	Interproscan
IPR049552 all species →	Domain	Polyketide synthase, dehydratase domain, N-terminal	Interproscan
IPR016035 all species →	Homologous_superfamily	Acyl transferase/acyl hydrolase/lysophospholipase	Interproscan
IPR042104 all species →	Homologous_superfamily	Polyketide synthase, dehydratase domain superfamily	Interproscan
IPR049900 all species →	Domain	Polyketide/metazoan fatty acid synthase, dehydratase domain	Interproscan
IPR020807 all species →	Domain	Polyketide synthase, dehydratase domain	Interproscan
IPR050091 all species →	Family	Polyketide and Nonribosomal Peptide Biosynthesis Enzymes	Interproscan
IPR020841 all species →	Domain	Polyketide synthase, beta-ketoacyl synthase domain	Interproscan
IPR014043 all species →	Domain	Acyl transferase	Interproscan
IPR000731 all species →	Domain	Sterol-sensing domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43775 all species →	FATTY ACID SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004315 all species →	Molecular Function	3-oxoacyl-[acyl-carrier-protein] synthase activity	Interproscan
GO:0006633 all species →	Biological Process	fatty acid biosynthetic process	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016740 all species →	Molecular Function	transferase activity	Interproscan
GO:0016746 all species →	Molecular Function	acyltransferase activity	Interproscan
GO:0004312 all species →	Molecular Function	fatty acid synthase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN10193-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.