Detailed information of ANN10232-RA in Leptoseris scabra

Genomic Location: Scaffold_8__1_contigs__length_51692913:6852179...6870275
NR annotation: XP_020626809.1, schlafen family member 13-like isoform X2 [Orbicella faveolata]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B1ARD6Schlafen family member 9 OS=Mus musculus OX=10090 GN=Slfn9 PE=2 SV=1
G1SRW8Protein SLFN14 OS=Oryctolagus cuniculus OX=9986 GN=SLFN14 PE=1 SV=2
Q5U311Schlafen family member 13 OS=Rattus norvegicus OX=10116 GN=Slfn13 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001950 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04326
all species →
SLFN_AlbA_2Schlafen, AlbA_2DomainInterproscan
PF21026
all species →
SLFN_GTPase-likeSchlafen, GTPase-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029684
all species →
FamilySchlafen familyInterproscan
IPR007421
all species →
DomainSchlafen, AlbA_2 domainInterproscan
IPR048729
all species →
DomainSchlafen, GTPase-like domainInterproscan
IPR038461
all species →
Homologous_superfamilySchlafen, AlbA_2 domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12155
all species →
SCHLAFENInterproscan

 Gene Ontology
No Gene Ontology signature was detected for ANN10232-RA. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN10232-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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