Detailed information of ANN10325-RA in Leptoseris scabra

Genomic Location: Scaffold_8__1_contigs__length_51692913:8586117...8590453
NR annotation: KAJ7393715.1, ESX homeobox 1 [Desmophyllum pertusum]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q02814Homeobox protein CHOX-CAD2 (Fragment) OS=Gallus gallus OX=9031 GN=CHOX-CAD2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000051 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046
all species →
HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017970
all species →
Conserved_siteHomeobox, conserved siteInterproscan
IPR051000
all species →
FamilyHomeobox DNA-bindingInterproscan
IPR009057
all species →
Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001356
all species →
DomainHomeobox domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24324
all species →
HOMEOBOX PROTEIN HHEXInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000981
all species →
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355
all species →
Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978
all species →
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154
all species →
Biological Processcell differentiationInterproscan
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN10325-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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