Gene detail

Detailed information of ANN10358-RA in Leptoseris scabra

Genomic Location: Scaffold_8__1_contigs__length_51692913:9104286...9118204
NR annotation: CAH3032466.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN10358-RA

ATGAGTAGGACAGCTCGCGTTACTTTCAGCTACGTTGCTGAACAAGAGGACGAACTTAGTCTAGAAGTTGGAGACGTCATCACAAATATAGCAGACGTGGATGTTGGATGGTGCGAGGGAATACTTAACGGGAAAAAAGGAGTGTTTCCGAACAATTTTGTAGAGGAAGTAGTCGCTCCCGAGCCAAGCTCTAACGTTAACACAGCTGTACATGAAAATCCCTTCATAGTGGGGATATGGATATTTTCTGTAGCTACACAATGCCACAGAGCACTGACTTGTAAAATAGGATCTTATCATTTATTTTTGTCAATGACAGTTACGGGCAAGAAGGCTAAAGTGACATTTGATTACGATGCCCAAGATCAGGATGAGCTGTCTCTGAAAATGGATGATATTATTGATGTTCTGGGTGAAGAAGAGCCTGGCTGGTGGAAAGGTCAACAAGGAAACAAAATTGGAGTGTTTCCCTCAAACTTTGTAGAACTCATTGACGGAAATGATATTGTACAATCTAAGGACAAACCAGTGGAGACAAAACGTAAACATCCAGAGGAACCTGTACCACAAGAAAAAGAGACAGCAAAAAATGAACATGTGGACGGCTCGATTGACGAAGATGATACAGGAATTACCAAAAGGCACTCTAGCATTGGGGCAGCAGCCAAGAAGTTACCTGGTGGAGGGATGGGGTTTGGGAATCTAATCAATCCTAATATTTTAGCTGAGAAGAAACTCAAGAGAGTCCATCATGATGAAAAGAGAGAAAAGAAAGGAAAATCAGAGCTGGAGGAGAATTCTGTCCCAGCCGCTGAACCAAGCAAAAAATCAAAAGCTCCCGTGAGTGCCAAGTCAAGACCAGCACCTCCCGTTCCTCTTACCTCCCCTGTCAAGAAACAAAATGAACGAGCCAAAGTTACGTTTGCCTACGAGCCTGAAAATCACGATGAACTTAAGTTAGTCGAAGGTGACATTGTCACCGTAATGAACAAAGATATTGTTGACAATGAAGGTTGGTGGGAAGGAGAAGTGAATGGCAAAGTTGGCGTGTTTCCCAACAACTTTGTTGAACTGCTGCCTCCTGAGGAGGAAGACAAGGCTTCTGTTCCTCCCACAGCTGGCAAGAGAGGTGTACCTGTGCCACCAAGTAAAGATGAAACAAAAACTTCACCAATACGTAAGAAGCCTCCCCCATCTCTTCCTGTGAAAGACGAATCAGACTCGGATGCTACTCCGGAGCCAGCCCTCCCACCTGGACGGCCAGATAAGAAGCCAGCGCATGTTATGTCAAAGGAACTAGCCTCGCCTAAGAAGACTGTTCCATCCCATCCTCCTGGGGGTGGGTCAGATACTGTAGAGGCACCCCGACCAACACCTGGAAAGAAGCCGGCAGCACCACAAAAGCCTAATCTTCCACCTAAGAAACCTTTACCGGCGAAGACCAAGAAACCTGACATTACAGGAAAGAAGCCGCCAGAGAAGAAGGTGGAGCCAGAGAAAACTGCAGCTGTGAGAAAGAGCGTGGAGGATACCAGGGAGCGCGCTGATAGCAAGCAGGCCGAGAGTTCTCATGTGAAAGAGACACCAAAGGATGAGGAGCATTCCAAGCCAATGCCTGAAATCAAGACAGAAAATGTTGAAGAAGCTCTAATTTCTTTTGATGACGTCCCAGAGACGGAAACACTAACCCATTTGACTACAAACAGAGCCAAACTCCCTCAAAAGAGGCCACCATCCAAGGAGGGGCGGTCGACTGACTCTGCTCGTCTTAGTGGAAACTTTGAGGAACAACTAGCTGAAACAATTAAACAGCCACCTGGTCGCCCTAAAGAAGCACCAAAAGAACCAGCTTGGAAAAGAGAGGTTCGAGAAGCCCGGGAAAAGAAACAGACTGCAGATGAGAAGACGCCTCCTCCTACATTAACTCCCAAAAGCGACGCTGTAGAAAAACGGAAGTCAATACACAAAGAAGAAGCACAGGCGCAAGCTCCGCCCGTCCAGAAAGTGGAGCCTTTTGCGACGGCAGCACCAGGTGAGGTTGAAAAGTTGCGAAAAGAGGTTTCCGAGCTGCGAGAAATGATGAGCAAAATGGAGAAGAAGTACAACGAAATGATGAAGAAACTAGAAAACGAGATCGAAATGCTCACAAATGACTTTGATGAAGAAAAGAAACAAAACGCGGCGCAAATCGCATCGTTCAAAGTGGAATTAGACAGACTAAAGAGACGCCAGTCTCGATTTAGCGTAGAGGACTCTCAGTGA

Transcript

ANN10358-RA

Protein

Uniprot

Uniprot term	Description
Q96B97	SH3 domain-containing kinase-binding protein 1 OS=Homo sapiens OX=9606 GN=SH3KBP1 PE=1 SV=2
Q925Q9	SH3 domain-containing kinase-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Sh3kbp1 PE=1 SV=2
Q8R550	SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14604	SH3_9	Variant SH3 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452	Domain	SH3 domain	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR050384	Family	Endophilin/SH3RF	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14167	SH3 DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007015	Biological Process	actin filament organization	Interproscan
GO:0016477	Biological Process	cell migration	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12470	SH3KBP1, CIN85; SH3 domain-containing kinase-binding protein 1	-	Membrane trafficking	ko04131	deepkoala