Gene detail

Detailed information of ANN10449-RA in Leptoseris scabra

Genomic Location: Scaffold_8__1_contigs__length_51692913:12708138...12746175
NR annotation: DAC81289.1, TPA_asm: PolB [Corynactis coral adintovirus]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN10449-RA

ATGATCACCCAAGGTCAAGACGGTGATTTATTGCCCGATCGATTTTTTGATGTCATTAATAGCCTCAAGAAATACACAATTTCATTTCTTTGGGACTTGATAGCATTGGCTGCCTCCATATACAACAAGGAATCCCAGTCAGACCTGCTCAGAGTATGTCCGTCTCCCTGTGGTTGTGTTTGTGAACTGTGGATTATGTTCATCCACCTTATGGATCACTTGAGCGCCAAAACAGAGGTAGAGTCATTCTGGTCAGCGGTATCGTCTATCATGTCAGAGATCCTTCATCCCAAAGAGGCGGCAGAGCCAGACAGCCAAGAGTCCTGTACACAGTCATGGGCACAGTCCTGTGCTCCTCCCGGTTTCACAGTGAAGACGCCTGTTGGTTTTTGTTGGTGGCTGTTGACACACTTGGCTCCGCTGTACTGGTTTACCGATAAAGGAGTCTACTCCCAGAGGAAGAAGGGTTGTGTCCCAGGAAACTGGGTTCTAGCTCAAGATTTGCTGAAATCGTCTCTACATAGTAACAAGGATAGCCAAGAAGAATCTCAGCGACGTTTCTGCCTTCGTTGTTGTATTTCACTGTCCTATCACTGGTCTGCAAACTCTGATCTCATTCTGTGGCTGTGGGATTACTTTCACAAGAGAATGAACGATTCATTTCACATCCCAGGCCAATCTTTGAGCAGTTTTGCTATTCTCAGTCCTTCTGCTCTTCAGTGGATGGAACAGTGCTTTAAAAGATCTAAGGATACCCAGCAAAGCTCGGTTATTCCAGAACACGAAACCAGTTTTACTTTGTTCTTGCGACTGGTGTCCGTTCACCTCACGAAATTACTACACAGCGGATCACTTCAGGCGTGGAAACAGATCAAAGGAAGATTCTACTCCAAGTTTCACAAGCGGCGTATGGAAGAGCTAAACAGTAAGGGACTTCACCAGTTTATCAGTCTTTTTCTGACTTTGTCGTGTGTGGCAGACCTCGAGGATGTGGCGAACAAGATGTGCTCTTTTCTTGATCTGTTGGACTTCAGCAAGATGCAACACGAAAAGAAAACGTGCGTCTGGAAAGGGCTGTTTGCTTTGGTGCTTATTTACAAAGAGAAGAACGTGGATTTTGGTTACTTGGCAGAAAGATTGTCACAGAGTTTTGCGGCTGTCGCAAGGGAATACACTGAGTGTTCTTCACGAGATAAAAATCATCAGAAAAACAGCTGGCGATTAATCACGCTTTACTTGGACAGCGCACAGGATGTGTTTGAGCACAAGAACAAACAGGACTTATCTGAAAGCAAACTCTTTGCCGATGGGTTTCAGTATCTCTTTCGTTCCTGTCGCGATAACGACCTGCGACATTTGCTGACGTTTGTACAAACAACCTTCGCGACATTAACGCAAAACACGAGAAGAAAGAAGGAAACTACAGACCCTACCAGTGGCATGTGGAAGCACGTATTTAGTCACGTGAGAGGCCTAGTATATGATGCACAGTGTATCCAGTCCGTACCCAGTCCCTTAGCAGACACTCTCGCCGCGTTTACTCTTTCTGCACTTGAAAGGCACCCTGGGGAAGTCACAGGCTTCCCAGGCGTTTCATTCAGAAGTCTCTTCCAGGAGCTTGGCGTTCAGGATGAGATGTCTGCCTGTTTTTGTTGTCGATTCCTGTGCCACATTTTACCTTCCCCAGAGGCAATGACGGCCATTGAAACAGCGCACTTGGAAGGAAATGTTATCCATGCTTGGTTCAGATGTCTCCTGCAGCTTCCTCCCTCCCATGAAGGTCTTGCTGAACTCACAAGGGCAGCTGCTAAGCTATCTGAGATGAAAATGATATCAAGGAATCAGGCAGGATTTGGGACTGGTGAAAGCAGCGAAACATCACTTCAACTCTTTATCATTGCGCTTGGACGTCACCACTCTTCTTTGACCAAGTTTGACGAGTCAATCCAGTTTCGAGAGAAGGTGCAAAAATACCTTGGTGACGTCATGAAGTATGTTGATCACGTGCTAAAAAATGCAGGGCCCTCAGACCTTCTAAGGCTAGCTTATCATGTCGCAGGGCTGCTGGCGAAACATTGCTACAAAATTATTTACAGTAAGACCCAGCCCAGATGTCTTTTTCCCCGGTTAGTGGACCAGTTTGCTCTGCCGTTACCGAACAGCAAGAAGCCAGTGGCGCCGCTTGTAATGCAGTGTATTAAGACGTACCTACATCAGTTTCTACAGGGTCTCGCCTGCCTGGACTTCAAGCGAGATGAGTTTATTCGAAGAAAGATCAAGCAAGTGTTCACCACGTATTTTCGCCTTTTTAACCAGATGTTACAAACGGCCACCCAGTCTTCCAATATTCCGACGAAGAATCCGTTCATGGTTGTTCTTAAAGGTTCCTGTGTATCCAGCCCAACTCCAGAGAGCAGCGAATTCCGTCAGTTCACAATAGAGATCATCCGGGAATCTTTCCTACACCTACCGCAGCCGCCCGCAAACCTAACAGCGACATTGTACTTCTTGGAGCAGCTGTTTAGGAAGACGCTTTCCCCATCCGAAACAGCCAGGAACACTCCTGTATTGCTGACCGCCGTCACTGGTTGCTTGTTGGCATGCAACCAGTTCACTCCAGGAAATGAGCCGCCAGAGATCAGACGACAAGCATCAACTGATGGTTATATGATAAATAAAAAAACATTGAATCCAACCAAAGGACACTTGACTGAAAATGGCTATTACATGGGTACCAATGGCTTGGCTCATCGATTCATCTTTGAGGCAGTAAATAACACACATATTCCATCCAAAATGCAGAAACCAATACCAGCTCCTCGCAAAAAGAAAGTTACTCCAATTCCCAAACCACGAAAATCAGTAAAGCAATTGGTGAAAGAATATGAAAACACAATTATTGCTCCACCAATGGCATTTAGAGATGGACCTCAACCTTTGCCGAGAAACAACATAATTCCACCTCCAATTCAATTTGCTGATAAACCCAAAGTTGCACCAAGATTGAAAAAAGTATCATTTGATAATCGAATGATACCCAGACGTCCAATTCCAAGGACTCGGAAAAAGAAAACTGCCCCAATTCCTGAACAGAGAACTCAAATCACAGAAGTTGCAAGAGCATTCCAGGGATATACAAAATCTTACGAAGTTGGAATCAAAAATACGACAGATCCTTTGATTCAAATGAGTTCAACCAGACTAGCTATTGCTCATTTTATGAAACAATTATTAACTCAAATGAGAGGAATTAAATTTATTGAAACTTTGACAATTTATTTTGAACAACAAAAAGGAAACCAAACTGTCTCCAGAATTGGATATTTTAATAGTAAACCAAAAACAATAACTAATGCCAATGATTTTCAAGAATCTTTGGATGTTAATGTTGAACAAATTATGAATGATATTCACAAATGGATTAGTGAAGGTTCAGCTTGGATAATTAAATCAATCAATGGACATTACATCAATATTATCAAATATAAACCCCTTTCTGGAAGTTCATACATTCAACTCCCAACTGAACTTCAACATCACAAACATGGATTGATAAATCTCAAGAATAAAGACAATGAATGCTTTCGTTGGTGTCACATTAGACATTTGAATCCACGAAATGACAATCCACAAAGAATCAAAAAAACTGATAAAGCCTTTGTGCCACAATTGAATTACGAAGGAATAGAATTCCCTGTTTCAATCAAACAATATAACAAAGTTGAAACTCAAAACAGTATTAACATCAATGTTTTCGGTTATGAAAACAAACAAACTTATCCAATTTATGTATCCAAAGAAAAGTTTGAGAATGTGATGAATCTATTGCTAATCTCAGATGATGAAAATAAACATTACTGTCTTATCAAAGATTTTAATCGATTTATGCACCACAAAACCAAATCACATCAAAGAAAACATTTTTGTATGCATTGTTTGCAATGTTTTTCATCAGAACGAGTTTTAACCAAACATCATAAGGTATGTATTGAAATCAATGGTGAACAATCAATCAAAATGCCCGAAGTTGGTTCCAAAATCAAATTTGAAAATTACCGAAAACAGCTCCAAGCACCATTCGTGATATATGCAGATTTTGAAGCAATTACTGAACCAATTCATGGTTGTAGTCAATCTAACCAACAATCTTTTACTGAAGCTTATCAAAAACACACTGATTGTGGTTTTGGATACAAAGTTGTTTGCTGCTATGATGACAAATATTCCAAACCAATAAAATATTATCGTGGAGAAAAAGCTGTTTACAAATTCATGGAAGCAATGTTGGATGAAGTTAAATATTGTCGTCAAACTATCAAATCTAAATTCAAGAAACCACTTATTATGACTCCAGAAGATGAAGACAAATTTCGTGAAGCAACATCTTGTCACATTTGTGGCAAAGAGTTTAAGAAAACTCCTAGGTCGGGTAATTCCTCCGGAAGGGGAAAACGTGTTAGAGACCATTGTCATGTTAATGGACAATTCCGTGGCGCGGCTCATGATGATTGCAATTATAACTATTATTTGACTGATAAAATCCCTGTTGTATTCCACAATTTGAAAGGATATGATAGTCATTTTATTATGCAAGAAATTGGTAAAATTGTGGAAAATAATACTTACGTGGATAGAAAAGGAGAAACCAAACACCATCAAATCAATGTAATCCCAAATAATATGGAGAAATACATGGCATTTATGTTGGGATACAATCTTGTATTCATCGATAGTTTGCAATTTATGAATCAATCATTGGCCAATCTTGTGAAAAACTTGCCAGAAGATGCTTTCAAATACACAAAACAAGTGTTCAAAGATAAAAAATTGCGATTAATGAAACAAAAAGGAGTTTATCCCTATGATTTCATGAGTAATTTTGATAAGTTTAATGATACACAATTACCAACCAAAGATGAATTTTACAGTCAAATGAATAATACTCATATTACTGATGAAGAATACAGTCATGCACAAAATGTTTGGAATACTTTTAATTTGAAAAATATGGGAGAATACCATGATTTATATCTCAAATCTGATGTATTATTGCTGGCTGATGTTTTTGAAAATTTCAGGAAAACATGTTTGGAATATTATAGGTTGGATCCAGCTCATTATTTTACATCTCCAGGATTATCTTGGGATGCAATGTTGAAAATGACTGAAGTCAATTTGGAATTAATCACAGATGTTGATATGTATCAATTTGTTGAAAAAGGTCTTCGTGGTGGAATCAGTTACATAGCCAACAGATACGGTAAAGCTAACAACAAATATATGCAAAATTACAATCCAAATGAAACCAGCAAATATCTCATGTATTTGGATGCAAATAATCTCTATGGTTGGGCTATGAGTCAATATCTTCCAACTGGAAATTTCAAATGGTTCAATAAACAACAAATAAAAAATATTAATTTGAAAACTATTAGCCCAGAAAATGAAACTGGATATTTATTGGAAGTTGATTTGGAATATCCTCATGAATTACATGACCTGCATAATGATTATCCATGTGCTGCTGAACAAATCAAAGTGACACAAGATATGCTGTCAGATTATTGCCAGAAAATTGCAAACAAATTTGGAATCAAAAGTGGACAAGTCAGCAAGCTGATTCCAACATTAGCAAACAAAACCAAATATGTATTACATTATAGAAACTTACAATTATACCGTGAATTGGGACTCAAATTAACTAAAATTCACCGTGTTCTGTCCTTTAATCAAAGTCCATGGCTCAAAAAGTATATTGATTTCAATACACGACAAAGAACTAATGCAAAGAATGCATTTGAAAAAGATTTCTTCAAATTAATGAACAATAGTGTCTTTGGGAAAACAATGGAGAATATCAGAAAACGGGAAGATATACGGTTAGTTACCAATGAGAAACAATTATCGAAACTGACTTCCAAACCAACATTCATCAATAGCAAAATATTTAATGAAAACTTGGTTGCAGTTCACAAAATCAAAGAATCATTGACTCTCAATCGACCAGCATATGTTGGAATGTGTATCCTTGATTTGAGTAAAACTCTCATGTACGACTTTCATTACAATTTTATAAAAAATAAATATGGTAACAAAGCCAAATTACTGTTTACGGATACCGATAGTTTGACATACGAAATTGAAGCAGCAGATGTGTATTCTGATTTCTGGAATCACAAAGATATGTTTGATAACTCGGATTATCCATCAGATCATCAATTCTTTGATGCCACAAACAAGAAAGTAATTGGCAAGTTCAAGGATGAAGCTGCTGGAATTCCCATCACTGAATTTGTGGGATTGAGATCCAAAATGTATTCTTACATCAAAGACAATAATAATGGTGGCAAAACGGCTAAAGGAATCAAAAAGAATGTCATCAAAAAAGAAATTCAACATTCTGATTACAAAGATGTTCTTTTCAATGAGAAACAGTTGCATCATCAAATGAAAACAATTCGGAGTAACCATCATGAACTTGGTAGTTACACGATAAATAAAACATCGTTGTCATGTTTTGATGACAAACGGTATCTGCATCCTGATGGTGTCCATTCCTATGCTTATGGCCATTGCCATTTAGCACAGGAATAA

Transcript

ANN10449-RA

Protein

ANN10449-RA

MITQGQDGDLLPDRFFDVINSLKKYTISFLWDLIALAASIYNKESQSDLLRVCPSPCGCVCELWIMFIHLMDHLSAKTEVESFWSAVSSIMSEILHPKEAAEPDSQESCTQSWAQSCAPPGFTVKTPVGFCWWLLTHLAPLYWFTDKGVYSQRKKGCVPGNWVLAQDLLKSSLHSNKDSQEESQRRFCLRCCISLSYHWSANSDLILWLWDYFHKRMNDSFHIPGQSLSSFAILSPSALQWMEQCFKRSKDTQQSSVIPEHETSFTLFLRLVSVHLTKLLHSGSLQAWKQIKGRFYSKFHKRRMEELNSKGLHQFISLFLTLSCVADLEDVANKMCSFLDLLDFSKMQHEKKTCVWKGLFALVLIYKEKNVDFGYLAERLSQSFAAVAREYTECSSRDKNHQKNSWRLITLYLDSAQDVFEHKNKQDLSESKLFADGFQYLFRSCRDNDLRHLLTFVQTTFATLTQNTRRKKETTDPTSGMWKHVFSHVRGLVYDAQCIQSVPSPLADTLAAFTLSALERHPGEVTGFPGVSFRSLFQELGVQDEMSACFCCRFLCHILPSPEAMTAIETAHLEGNVIHAWFRCLLQLPPSHEGLAELTRAAAKLSEMKMISRNQAGFGTGESSETSLQLFIIALGRHHSSLTKFDESIQFREKVQKYLGDVMKYVDHVLKNAGPSDLLRLAYHVAGLLAKHCYKIIYSKTQPRCLFPRLVDQFALPLPNSKKPVAPLVMQCIKTYLHQFLQGLACLDFKRDEFIRRKIKQVFTTYFRLFNQMLQTATQSSNIPTKNPFMVVLKGSCVSSPTPESSEFRQFTIEIIRESFLHLPQPPANLTATLYFLEQLFRKTLSPSETARNTPVLLTAVTGCLLACNQFTPGNEPPEIRRQASTDGYMINKKTLNPTKGHLTENGYYMGTNGLAHRFIFEAVNNTHIPSKMQKPIPAPRKKKVTPIPKPRKSVKQLVKEYENTIIAPPMAFRDGPQPLPRNNIIPPPIQFADKPKVAPRLKKVSFDNRMIPRRPIPRTRKKKTAPIPEQRTQITEVARAFQGYTKSYEVGIKNTTDPLIQMSSTRLAIAHFMKQLLTQMRGIKFIETLTIYFEQQKGNQTVSRIGYFNSKPKTITNANDFQESLDVNVEQIMNDIHKWISEGSAWIIKSINGHYINIIKYKPLSGSSYIQLPTELQHHKHGLINLKNKDNECFRWCHIRHLNPRNDNPQRIKKTDKAFVPQLNYEGIEFPVSIKQYNKVETQNSININVFGYENKQTYPIYVSKEKFENVMNLLLISDDENKHYCLIKDFNRFMHHKTKSHQRKHFCMHCLQCFSSERVLTKHHKVCIEINGEQSIKMPEVGSKIKFENYRKQLQAPFVIYADFEAITEPIHGCSQSNQQSFTEAYQKHTDCGFGYKVVCCYDDKYSKPIKYYRGEKAVYKFMEAMLDEVKYCRQTIKSKFKKPLIMTPEDEDKFREATSCHICGKEFKKTPRSGNSSGRGKRVRDHCHVNGQFRGAAHDDCNYNYYLTDKIPVVFHNLKGYDSHFIMQEIGKIVENNTYVDRKGETKHHQINVIPNNMEKYMAFMLGYNLVFIDSLQFMNQSLANLVKNLPEDAFKYTKQVFKDKKLRLMKQKGVYPYDFMSNFDKFNDTQLPTKDEFYSQMNNTHITDEEYSHAQNVWNTFNLKNMGEYHDLYLKSDVLLLADVFENFRKTCLEYYRLDPAHYFTSPGLSWDAMLKMTEVNLELITDVDMYQFVEKGLRGGISYIANRYGKANNKYMQNYNPNETSKYLMYLDANNLYGWAMSQYLPTGNFKWFNKQQIKNINLKTISPENETGYLLEVDLEYPHELHDLHNDYPCAAEQIKVTQDMLSDYCQKIANKFGIKSGQVSKLIPTLANKTKYVLHYRNLQLYRELGLKLTKIHRVLSFNQSPWLKKYIDFNTRQRTNAKNAFEKDFFKLMNNSVFGKTMENIRKREDIRLVTNEKQLSKLTSKPTFINSKIFNENLVAVHKIKESLTLNRPAYVGMCILDLSKTLMYDFHYNFIKNKYGNKAKLLFTDTDSLTYEIEAADVYSDFWNHKDMFDNSDYPSDHQFFDATNKKVIGKFKDEAAGIPITEFVGLRSKMYSYIKDNNNGGKTAKGIKKNVIKKEIQHSDYKDVLFNEKQLHHQMKTIRSNHHELGSYTINKTSLSCFDDKRYLHPDGVHSYAYGHCHLAQE

Uniprot

Uniprot term	Description
E1C2Z0	Protein MMS22-like OS=Gallus gallus OX=9031 GN=MMS22L PE=3 SV=1
B3DIY3	Protein MMS22-like OS=Danio rerio OX=7955 GN=mms22l PE=2 SV=1
Q6ZRQ5	Protein MMS22-like OS=Homo sapiens OX=9606 GN=MMS22L PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14910	MMS22L_N	S-phase genomic integrity recombination mediator, N-terminal	Family	Interproscan
PF14911	MMS22L_C	S-phase genomic integrity recombination mediator, C-terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029425	Domain	Protein MMS22-like, N-terminal	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR044925	Homologous_superfamily	His-Me finger superfamily	Interproscan
IPR029424	Domain	MMS22-like, C-terminal	Interproscan
IPR038563	Homologous_superfamily	Recombination endonuclease VII superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31511	PROTEIN CBG23764	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-