Gene detail

Detailed information of ANN10508-RA in Leptoseris scabra

Genomic Location: Scaffold_8__1_contigs__length_51692913:13887419...13913643
NR annotation: CAH3019770.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN10508-RA

ATGTTGAAGGGTTTCTCGTCTGCCGCATGGCAAGTTTGTGTTGAGGGGTCTACGTTTTTCGTCCTCGTTGCTTTTACCGTGTTCCATTTGATAAAGGAATTTGTGAAGCGTTACAGCTTGTTGTTTCCGCAAAAAGAGAATGGAAGTTTACGAGAGGAAATGCCGGCCATTTTGGAATCCTTGGGACTGGACCCGCGGGAATACCAGACGGGCAAAGACAAGGTGTTTCTTCGAGACAGTCAACACTCTCTGTTACAATCACGGCTTCATTCGGAACAGATCCACAAGGTCTGTATTCTACAGCGCTGGATCAAAGGAGTGCTACAGAGGAGGCATTTTATCAGGCAGCGGAATGCTGCCATACTGATTCAGGCGGGGTGGCGCGGTTACTCAGTTCGTGCTGAACTCGAGCTGCAGGCTCTCGCTACCCTTCGGATCCAATCATTGTGGCGAATGTACGTGGCACGGCGTTACTATCTAGGTGTACGTGACAGGATAATTATGTTACAGAGTCACGCAAGGGGATATCTGGCGAGGAAAAGATATGCAGACAGAGTCCAACAGCATAGAGAGATGATTTTGCAACGGGATTCCTACAGCACGCCTGTTTCACCTCGGCAGGAAACGTCCCCGTCGCGGTCTCTGAGTCGATCGTTTAGTGATCCGTCGCGCTACCAAGCTACTTACTCCGAGGATGAGATGTCTGAAGACGATCTTGTAAAAAATCAGGAAATGTTCAACATAACGGAAAACGGAGAAGATATGAACCCCTGGCTGCCAAGGGACCGTTCACACTCCAAGGTAAAGGACATCGCTAAACGGTTTGAGAAAACACCACCGCAAAATGAAACGACGACCAAGGTGGTTCGTCAGAGGTCGAACTCTGAACCGAACAGCCCGGAAATCAAACGACACCCTCGGCCCCCTCAGATTGACCTTTCACCACAAAAACCCCTCAGACACGCATACAGCGACTTGAGCCCCATTCATTCTCCTACGTTACCCACGACGATGTCAGCCGAAGACATTCCAAGCGATCTTAAAGCTCCGACTTTCTCCCGAAAGCTCACGAGCAGTATCCGAAGGCGCCTTTCATCCAAAGCGAAAGCTGGGCAGCGGTTTAGCGCTTCAGACGTTTTGGACGACAGAATTGCCAGATCTCCCTCGGACGATGTGGAGTATTTGAAGCCAGATTTCCCCGGTAGCTTGAACCGTGGAGAGTATGGCGGAAAAGTGAAGAAAGGATTCCTTCGTAAAATTGCGCGAAACAACTCTTTCAGGAGAAGGTCCGATTCCCATTTGAACAAACTTGCCGCGGCGAAGAAATCTGATTTGGATGGTGGAACTGCGTCGAATGAAGACTTGACAAAGGCGCTGAAGCAGACCAAGATAGTCAGCTGTGCCATCACCACAGGCCCTGTGCAGTGGAAAAACACCGGCAAGAAGTTCTTAAAGGGCAGCGAGGAGCTAGGCGAACTGGAGACGTTTTTGATGAGTAAGGTCTCCATGCTGAACAAGGAAGAGAACAAACGAGATACCATTGTCGACCGTGTGTTCAGAAAAGCTCTTCAGGAATTTCACATGCAACTCATCACGTCTTACTCTGTTCTCATGAAGGGAGACACTTCTTATACGCTAAAGTACGAAGATTTGATGGGCCAGTTCGAGTTCACACTGAATAAGATCATCAAAAGTGAGCGGATTACTGACAGTTTTCCTGTGATCATGGGTGTAAACGCGTTTGCTGGAGTTCTGTCCGAGTTTATCACCTCAAGAACGCTTACACAGACGAAGCCGGCCAAGCACCACAAGAAACCTCATGTAAAGAAGCGAAAGTCCTCGGAGCTCACGGAATTTAATGGGCACAAGTTCGCCACAACGCAGTTCAGTATTCCAACATTCTGTGAACACTGTGGAGGGTTCATCTGGGGATTGGACAAAGGATTCGTTTGTCAAGAGTGCAGATTTACTTGCCACAAGAAGTGTCACGCCAAGTCTCGAAACATTTGCCGCAAGGGGACCAACAAGTCCAAAGGAAAAACGGGACTGTTTGGTGGTGATCTGTCCTGTCTCATTTCCAACGAAAACTCCGTTCCACCACTTGTTGACAAACTCATCCAAGACATCGAAAAAAGAGGTATATACACGGAAGGTCTTTACAGAAAATCTCCGAGCACCGTTGCTGTCAAAAAACTCAAGAACGACATTTGTACAGTAGGAATTGACGCTGTCAATTTAGAGGAGTTTACCGTTCACGTGGTCGCGGGAGTTCTCAAGCTGTTCTTCAGACAGTTGGCGGTTCCTGTTATCACGGCTGATTTCTACGTGGATTTTATTCGAACAGCAGACCTAAGCGAAGAAAAGTTACGACTGCAGGCTCTCTATGCTTTGGTGCAAAAACTTCCTCGAGCGAGCAGAAACACCCTGGAAAGACTTGTGTTTCACCTCGCAAGAATATCCCAACATCAGGAGGAAAATCTGATGAACGCAAATGCTCTGGCCATAATTTGGGCGCAGTGCGTCATGGCGACTCCACCTGGAATGAGCGCGTTGGAGAGCATGCAAGACGTCGCGAAACAGACCAAATGCCTCGAAACTCTCATCCTCGGCCAGTTGTCCAAGATCCGGTCAACTCTAAACAACATCCGGGTAATTGACAGTGCAACGGATACAGCTCACAAGCGCCTGTCAATCTTGAGGCTCAATGAAGAAGATGAAGGTTTAGTCGAAAAAGATCTTGAAGGCGAAGAACACGAAAAAATTCTTCTCAGACAGCAGCTCTTTGAACTACGGGAACAGAGAGCTCTTTTAACAGAAAAACTGACCAGTTTAGGGTGTGAAGGCCCAAGGTTGGCGGACAGTGAAGAGGATCTGGCGAGCGATGATTGTCAAACTGACGACGATTTGGAAGGAGCCGAAGAAGAGGAGCGGAGAGAGGAGTACGCACTCACCTTTGACCTCCCCGCCACTCCAATTCAGCTGCGTCATTTGACCAAGAACCGCGCCAGGCAACCAACGGTGAGAAGACGCCGTCCAACGCGGTCCAAGTTACGCGAACAAGCGGTCCAGAGATAG

Transcript

ANN10508-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
E7EZG2	Unconventional myosin-IXAa OS=Danio rerio OX=7955 GN=myo9aa PE=3 SV=1
Q8C170	Unconventional myosin-IXa OS=Mus musculus OX=10090 GN=Myo9a PE=1 SV=2
Q9Z1N3	Unconventional myosin-IXa OS=Rattus norvegicus OX=10116 GN=Myo9a PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002346 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00620 all species →	RhoGAP	RhoGAP domain	Domain	Interproscan
PF00130 all species →	C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	Domain	Interproscan
PF00612 all species →	IQ	IQ calmodulin-binding motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000198 all species →	Domain	Rho GTPase-activating protein domain	Interproscan
IPR046987 all species →	Family	Unconventional class IX myosin	Interproscan
IPR002219 all species →	Domain	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Interproscan
IPR046349 all species →	Homologous_superfamily	C1-like domain superfamily	Interproscan
IPR008936 all species →	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR000048 all species →	Binding_site	IQ motif, EF-hand binding site	Interproscan
IPR020454 all species →	Domain	Diacylglycerol/phorbol-ester binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46184 all species →	UNCONVENTIONAL MYOSIN-IXB-LIKE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0000146 all species →	Molecular Function	microfilament motor activity	Interproscan
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0005884 all species →	Cellular Component	actin filament	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN10508-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.