Detailed information of ANN10579-RA in Leptoseris scabra

Genomic Location: Scaffold_8__1_contigs__length_51692913:15413334...15416515
NR annotation: KAJ7321790.1, Tyrosine--tRNA ligase, cytoplasmic [Desmophyllum pertusum]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6TGS6Tyrosine--tRNA ligase, cytoplasmic OS=Danio rerio OX=7955 GN=yars1 PE=2 SV=2
Q5ZJ08Tyrosine--tRNA ligase, cytoplasmic OS=Gallus gallus OX=9031 GN=YARS1 PE=2 SV=1
P54577Tyrosine--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=YARS1 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001647 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00579
all species →		tRNA-synt_1btRNA synthetases class I (W and Y)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050489
all species →		FamilyTyrosine--tRNA ligaseInterproscan
IPR002305
all species →		FamilyAminoacyl-tRNA synthetase, class IcInterproscan
IPR014729
all species →		Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46264
all species →		TYROSINE-TRNA LIGASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004831
all species →		Molecular Functiontyrosine-tRNA ligase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006437
all species →		Biological Processtyrosyl-tRNA aminoacylationInterproscan
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0004812
all species →		Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006418
all species →		Biological ProcesstRNA aminoacylation for protein translationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN10579-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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