Genomic Location: Scaffold_8__1_contigs__length_51692913:20654991...20669235
NR annotation: CAH3171498.1, unnamed protein product [Porites lobata]
| CDS | ||||
| ANN10878-RA | ||||
| Transcript |
| ANN10878-RA |
| Protein |
| ANN10878-RA |
| Uniprot term | Description |
|---|---|
| D8VNS7 | Ryncolin-1 OS=Cerberus rynchops OX=46267 PE=1 SV=1 |
| D8VNS8 | Ryncolin-2 OS=Cerberus rynchops OX=46267 PE=1 SV=1 |
| D8VNS9 | Ryncolin-3 OS=Cerberus rynchops OX=46267 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00059 | Lectin_C | Lectin C-type domain | Domain | Interproscan |
| PF12947 | EGF_3 | EGF domain | Domain | Interproscan |
| PF07645 | EGF_CA | Calcium-binding EGF domain | Domain | Interproscan |
| PF00147 | Fibrinogen_C | Fibrinogen beta and gamma chains, C-terminal globular domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001304 | Domain | C-type lectin-like | Interproscan |
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR001881 | Domain | EGF-like calcium-binding domain | Interproscan |
| IPR000152 | PTM | EGF-type aspartate/asparagine hydroxylation site | Interproscan |
| IPR002350 | Domain | Kazal domain | Interproscan |
| IPR050373 | Family | Fibrinogen C-terminal domain-containing protein | Interproscan |
| IPR024731 | Domain | EGF domain | Interproscan |
| IPR018097 | Conserved_site | EGF-like calcium-binding, conserved site | Interproscan |
| IPR002181 | Domain | Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain | Interproscan |
| IPR016186 | Homologous_superfamily | C-type lectin-like/link domain superfamily | Interproscan |
| IPR018378 | Conserved_site | C-type lectin, conserved site | Interproscan |
| IPR014716 | Homologous_superfamily | Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1 | Interproscan |
| IPR016187 | Homologous_superfamily | C-type lectin fold | Interproscan |
| IPR020837 | Conserved_site | Fibrinogen, conserved site | Interproscan |
| IPR037221 | Homologous_superfamily | H-type lectin domain superfamily | Interproscan |
| IPR049883 | Domain | NOTCH1 EGF-like calcium-binding domain | Interproscan |
| IPR036058 | Homologous_superfamily | Kazal domain superfamily | Interproscan |
| IPR036056 | Homologous_superfamily | Fibrinogen-like, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19143 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005615 | Cellular Component | extracellular space | Interproscan |
| GO:0062023 | Cellular Component | collagen-containing extracellular matrix | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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